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Page 1
The transcriptional diversity of 25 Drosophila cell lines.
Genome Res. 2011 Feb;21(2):301-14. doi: 10.1101/gr.112961.110. Epub 2010 Dec 22.
Genome Res. 2011.
PMID: 21177962
Free PMC article.
Identification of functional elements and regulatory circuits by Drosophila modENCODE.
modENCODE Consortium; Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X, Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, Minoda A, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A, Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, Yang L, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B, Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA, Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW, Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP, Kellis M.
modENCODE Consortium, et al.
Science. 2010 Dec 24;330(6012):1787-97. doi: 10.1126/science.1198374. Epub 2010 Dec 22.
Science. 2010.
PMID: 21177974
Free PMC article.
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Gene prediction and verification in a compact genome with numerous small introns.
Tenney AE, Brown RH, Vaske C, Lodge JK, Doering TL, Brent MR.
Tenney AE, et al.
Genome Res. 2004 Nov;14(11):2330-5. doi: 10.1101/gr.2816704. Epub 2004 Oct 12.
Genome Res. 2004.
PMID: 15479946
Free PMC article.
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A tale of two templates: automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices.
Tenney AE, Wu JQ, Langton L, Klueh P, Quatrano R, Brent MR.
Tenney AE, et al.
Genome Res. 2007 Feb;17(2):212-8. doi: 10.1101/gr.5661407. Epub 2007 Jan 8.
Genome Res. 2007.
PMID: 17210930
Free PMC article.
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