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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1958 1
1968 2
1970 1
1977 6
1978 2
1979 1
1980 1
1984 2
1985 1
1986 1
1987 1
1988 1
1990 1
1991 1
1993 1
1997 2
1998 1
1999 1
2000 1
2001 2
2002 4
2003 7
2004 8
2005 3
2006 4
2007 2
2008 9
2009 12
2010 10
2011 10
2012 6
2013 11
2014 7
2015 12
2016 7
2017 19
2018 13
2019 14
2020 22
2021 18
2022 20
2023 19
2024 13
2025 1

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260 results

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Page 1
Enterococci enhance Clostridioides difficile pathogenesis.
Smith AB, Jenior ML, Keenan O, Hart JL, Specker J, Abbas A, Rangel PC, Di C, Green J, Bustin KA, Gaddy JA, Nicholson MR, Laut C, Kelly BJ, Matthews ML, Evans DR, Van Tyne D, Furth EE, Papin JA, Bushman FD, Erlichman J, Baldassano RN, Silverman MA, Dunny GM, Prentice BM, Skaar EP, Zackular JP. Smith AB, et al. Among authors: papin ja. Nature. 2022 Nov;611(7937):780-786. doi: 10.1038/s41586-022-05438-x. Epub 2022 Nov 16. Nature. 2022. PMID: 36385534 Free PMC article.
Histone Deacetylase Inhibition by Gut Microbe-Generated Short-Chain Fatty Acids Entrains Intestinal Epithelial Circadian Rhythms.
Fawad JA, Luzader DH, Hanson GF, Moutinho TJ Jr, McKinney CA, Mitchell PG, Brown-Steinke K, Kumar A, Park M, Lee S, Bolick DT, Medlock GL, Zhao JY, Rosselot AE, Chou CJ, Eshleman EM, Alenghat T, Hong CI, Papin JA, Moore SR. Fawad JA, et al. Among authors: papin ja. Gastroenterology. 2022 Nov;163(5):1377-1390.e11. doi: 10.1053/j.gastro.2022.07.051. Epub 2022 Aug 4. Gastroenterology. 2022. PMID: 35934064 Free PMC article.
Celebrating a body of work.
Papin JA, Mac Gabhann F, Pitzer VE. Papin JA, et al. PLoS Comput Biol. 2024 Sep 26;20(9):e1012441. doi: 10.1371/journal.pcbi.1012441. eCollection 2024 Sep. PLoS Comput Biol. 2024. PMID: 39325699 Free PMC article. No abstract available.
Computing Biology.
Nussinov R, Papin JA. Nussinov R, et al. Among authors: papin ja. PLoS Comput Biol. 2016 Jul 12;12(7):e1005050. doi: 10.1371/journal.pcbi.1005050. eCollection 2016 Jul. PLoS Comput Biol. 2016. PMID: 27403659 Free PMC article. No abstract available.
One thousand simple rules.
Bourne PE, Lewitter F, Markel S, Papin JA. Bourne PE, et al. Among authors: papin ja. PLoS Comput Biol. 2018 Dec 20;14(12):e1006670. doi: 10.1371/journal.pcbi.1006670. eCollection 2018 Dec. PLoS Comput Biol. 2018. PMID: 30571692 Free PMC article. No abstract available.
Improving reproducibility in computational biology research.
Papin JA, Mac Gabhann F, Sauro HM, Nickerson D, Rampadarath A. Papin JA, et al. PLoS Comput Biol. 2020 May 19;16(5):e1007881. doi: 10.1371/journal.pcbi.1007881. eCollection 2020 May. PLoS Comput Biol. 2020. PMID: 32427998 Free PMC article. No abstract available.
Wisdom of crowds in computational biology.
Papin JA, Mac Gabhann F. Papin JA, et al. PLoS Comput Biol. 2019 May 23;15(5):e1007032. doi: 10.1371/journal.pcbi.1007032. eCollection 2019 May. PLoS Comput Biol. 2019. PMID: 31120879 Free PMC article. No abstract available.
CD151 Maintains Endolysosomal Protein Quality to Inhibit Vascular Inflammation.
Chen J, Ding Y, Jiang C, Qu R, Wren JD, Georgescu C, Wang X, Reuter DN, Liu B, Giles CB, Mayr CH, Schiller HB, Dai J, Stipp CS, Subramaniyan B, Wang J, Zuo H, Huang C, Fung KM, Rice HC, Sonnenberg A, Wu D, Walters MS, Zhao YY, Kanie T, Hays FA, Papin JF, Wang DW, Zhang XA. Chen J, et al. Among authors: papin jf. Circ Res. 2024 May 10;134(10):1330-1347. doi: 10.1161/CIRCRESAHA.123.323190. Epub 2024 Apr 1. Circ Res. 2024. PMID: 38557119
Mechanistic models of microbial community metabolism.
Dillard LR, Payne DD, Papin JA. Dillard LR, et al. Among authors: papin ja. Mol Omics. 2021 Jun 14;17(3):365-375. doi: 10.1039/d0mo00154f. Mol Omics. 2021. PMID: 34125127 Free PMC article. Review.
The blossoming of methods and software in computational biology.
Mac Gabhann F, Pitzer VE, Papin JA. Mac Gabhann F, et al. Among authors: papin ja. PLoS Comput Biol. 2023 Aug 17;19(8):e1011390. doi: 10.1371/journal.pcbi.1011390. eCollection 2023 Aug. PLoS Comput Biol. 2023. PMID: 37590323 Free PMC article. No abstract available.
260 results