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Page 1
The chromatin accessibility landscape of primary human cancers.
Science. 2018 Oct 26;362(6413):eaav1898. doi: 10.1126/science.aav1898.
Science. 2018.
PMID: 30361341
Free PMC article.
Comprehensive Analysis of Genetic Ancestry and Its Molecular Correlates in Cancer.
Carrot-Zhang J, Chambwe N, Damrauer JS, Knijnenburg TA, Robertson AG, Yau C, Zhou W, Berger AC, Huang KL, Newberg JY, Mashl RJ, Romanel A, Sayaman RW, Demichelis F, Felau I, Frampton GM, Han S, Hoadley KA, Kemal A, Laird PW, Lazar AJ, Le X, Oak N, Shen H, Wong CK, Zenklusen JC, Ziv E; Cancer Genome Atlas Analysis Network; Cherniack AD, Beroukhim R.
Carrot-Zhang J, et al.
Cancer Cell. 2020 May 11;37(5):639-654.e6. doi: 10.1016/j.ccell.2020.04.012.
Cancer Cell. 2020.
PMID: 32396860
Free PMC article.
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Ancestry-specific predisposing germline variants in cancer.
Oak N, Cherniack AD, Mashl RJ; TCGA Analysis Network; Hirsch FR, Ding L, Beroukhim R, Gümüş ZH, Plon SE, Huang KL.
Oak N, et al.
Genome Med. 2020 May 29;12(1):51. doi: 10.1186/s13073-020-00744-3.
Genome Med. 2020.
PMID: 32471518
Free PMC article.
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Analysis of germline-driven ancestry-associated gene expression in cancers.
Chambwe N, Sayaman RW, Hu D, Huntsman S; Cancer Genome Analysis Network; Kemal A, Caesar-Johnson S, Zenklusen JC, Ziv E, Beroukhim R, Cherniack AD.
Chambwe N, et al.
STAR Protoc. 2022 Jul 31;3(3):101586. doi: 10.1016/j.xpro.2022.101586. eCollection 2022 Sep 16.
STAR Protoc. 2022.
PMID: 35942349
Free PMC article.
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Before and After: Comparison of Legacy and Harmonized TCGA Genomic Data Commons' Data.
Gao GF, Parker JS, Reynolds SM, Silva TC, Wang LB, Zhou W, Akbani R, Bailey M, Balu S, Berman BP, Brooks D, Chen H, Cherniack AD, Demchok JA, Ding L, Felau I, Gaheen S, Gerhard DS, Heiman DI, Hernandez KM, Hoadley KA, Jayasinghe R, Kemal A, Knijnenburg TA, Laird PW, Mensah MKA, Mungall AJ, Robertson AG, Shen H, Tarnuzzer R, Wang Z, Wyczalkowski M, Yang L, Zenklusen JC, Zhang Z; Genomic Data Analysis Network; Liang H, Noble MS.
Gao GF, et al. Among authors: mensah mka.
Cell Syst. 2019 Jul 24;9(1):24-34.e10. doi: 10.1016/j.cels.2019.06.006.
Cell Syst. 2019.
PMID: 31344359
Free PMC article.
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