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Multiplexed droplet single-cell RNA-sequencing using natural genetic variation.
Kang HM, Subramaniam M, Targ S, Nguyen M, Maliskova L, McCarthy E, Wan E, Wong S, Byrnes L, Lanata CM, Gate RE, Mostafavi S, Marson A, Zaitlen N, Criswell LA, Ye CJ. Kang HM, et al. Nat Biotechnol. 2018 Jan;36(1):89-94. doi: 10.1038/nbt.4042. Epub 2017 Dec 11. Nat Biotechnol. 2018. PMID: 29227470 Free PMC article.
Sparse allele vectors and the savvy software suite.
LeFaive J, Smith AV, Kang HM, Abecasis G. LeFaive J, et al. Bioinformatics. 2021 Nov 18;37(22):4248-4250. doi: 10.1093/bioinformatics/btab378. Bioinformatics. 2021. PMID: 33989384 Free PMC article.
Robust, flexible, and scalable tests for Hardy-Weinberg equilibrium across diverse ancestries.
Kwong AM, Blackwell TW, LeFaive J, de Andrade M, Barnard J, Barnes KC, Blangero J, Boerwinkle E, Burchard EG, Cade BE, Chasman DI, Chen H, Conomos MP, Cupples LA, Ellinor PT, Eng C, Gao Y, Guo X, Irvin MR, Kelly TN, Kim W, Kooperberg C, Lubitz SA, Mak ACY, Manichaikul AW, Mathias RA, Montasser ME, Montgomery CG, Musani S, Palmer ND, Peloso GM, Qiao D, Reiner AP, Roden DM, Shoemaker MB, Smith JA, Smith NL, Su JL, Tiwari HK, Weeks DE, Weiss ST; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium; TOPMed Analysis Working Group; Scott LJ, Smith AV, Abecasis GR, Boehnke M, Kang HM. Kwong AM, et al. Genetics. 2021 May 17;218(1):iyab044. doi: 10.1093/genetics/iyab044. Genetics. 2021. PMID: 33720349 Free PMC article.
FIVEx: an interactive eQTL browser across public datasets.
Kwong A, Boughton AP, Wang M, VandeHaar P, Boehnke M, Abecasis G, Kang HM. Kwong A, et al. Bioinformatics. 2022 Jan 3;38(2):559-561. doi: 10.1093/bioinformatics/btab614. Bioinformatics. 2022. PMID: 34459872 Free PMC article.
23 results