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Large-Scale Topological Changes Restrain Malignant Progression in Colorectal Cancer.
Johnstone SE, Reyes A, Qi Y, Adriaens C, Hegazi E, Pelka K, Chen JH, Zou LS, Drier Y, Hecht V, Shoresh N, Selig MK, Lareau CA, Iyer S, Nguyen SC, Joyce EF, Hacohen N, Irizarry RA, Zhang B, Aryee MJ, Bernstein BE. Johnstone SE, et al. Cell. 2020 Sep 17;182(6):1474-1489.e23. doi: 10.1016/j.cell.2020.07.030. Epub 2020 Aug 24. Cell. 2020. PMID: 32841603 Free PMC article.
Contrastive Learning of Coarse-Grained Force Fields.
Ding X, Zhang B. Ding X, et al. J Chem Theory Comput. 2022 Oct 11;18(10):6334-6344. doi: 10.1021/acs.jctc.2c00616. Epub 2022 Sep 16. J Chem Theory Comput. 2022. PMID: 36112935 Free PMC article.
On the role of transcription in positioning nucleosomes.
Jiang Z, Zhang B. Jiang Z, et al. PLoS Comput Biol. 2021 Jan 8;17(1):e1008556. doi: 10.1371/journal.pcbi.1008556. eCollection 2021 Jan. PLoS Comput Biol. 2021. PMID: 33417594 Free PMC article.
45 results