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BioCreative-IV virtual issue.
Arighi CN, Wu CH, Cohen KB, Hirschman L, Krallinger M, Valencia A, Lu Z, Wilbur JW, Wiegers TC. Arighi CN, et al. Database (Oxford). 2014 May 22;2014:bau039. doi: 10.1093/database/bau039. Print 2014. Database (Oxford). 2014. PMID: 24852177 Free PMC article. No abstract available.
Biocuration: Distilling data into knowledge.
International Society for Biocuration. International Society for Biocuration. PLoS Biol. 2018 Apr 16;16(4):e2002846. doi: 10.1371/journal.pbio.2002846. eCollection 2018 Apr. PLoS Biol. 2018. PMID: 29659566 Free PMC article.
iPTMnet: Integrative Bioinformatics for Studying PTM Networks.
Ross KE, Huang H, Ren J, Arighi CN, Li G, Tudor CO, Lv M, Lee JY, Chen SC, Vijay-Shanker K, Wu CH. Ross KE, et al. Methods Mol Biol. 2017;1558:333-353. doi: 10.1007/978-1-4939-6783-4_16. Methods Mol Biol. 2017. PMID: 28150246 Free PMC article.
Expansion of the Gene Ontology knowledgebase and resources.
The Gene Ontology Consortium. The Gene Ontology Consortium. Nucleic Acids Res. 2017 Jan 4;45(D1):D331-D338. doi: 10.1093/nar/gkw1108. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27899567 Free PMC article.
UniProt: the universal protein knowledgebase.
The UniProt Consortium. The UniProt Consortium. Nucleic Acids Res. 2017 Jan 4;45(D1):D158-D169. doi: 10.1093/nar/gkw1099. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27899622 Free PMC article.
Integrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources.
Huang LC, Ross KE, Baffi TR, Drabkin H, Kochut KJ, Ruan Z, D'Eustachio P, McSkimming D, Arighi C, Chen C, Natale DA, Smith C, Gaudet P, Newton AC, Wu C, Kannan N. Huang LC, et al. Sci Rep. 2018 Apr 25;8(1):6518. doi: 10.1038/s41598-018-24457-1. Sci Rep. 2018. PMID: 29695735 Free PMC article.
Overview of the interactive task in BioCreative V.
Wang Q, S Abdul S, Almeida L, Ananiadou S, Balderas-Martínez YI, Batista-Navarro R, Campos D, Chilton L, Chou HJ, Contreras G, Cooper L, Dai HJ, Ferrell B, Fluck J, Gama-Castro S, George N, Gkoutos G, Irin AK, Jensen LJ, Jimenez S, Jue TR, Keseler I, Madan S, Matos S, McQuilton P, Milacic M, Mort M, Natarajan J, Pafilis E, Pereira E, Rao S, Rinaldi F, Rothfels K, Salgado D, Silva RM, Singh O, Stefancsik R, Su CH, Subramani S, Tadepally HD, Tsaprouni L, Vasilevsky N, Wang X, Chatr-Aryamontri A, Laulederkind SJ, Matis-Mitchell S, McEntyre J, Orchard S, Pundir S, Rodriguez-Esteban R, Van Auken K, Lu Z, Schaeffer M, Wu CH, Hirschman L, Arighi CN. Wang Q, et al. Database (Oxford). 2016 Sep 1;2016:baw119. doi: 10.1093/database/baw119. Print 2016. Database (Oxford). 2016. PMID: 27589961 Free PMC article.
Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.
Natale DA, Arighi CN, Blake JA, Bona J, Chen C, Chen SC, Christie KR, Cowart J, D'Eustachio P, Diehl AD, Drabkin HJ, Duncan WD, Huang H, Ren J, Ross K, Ruttenberg A, Shamovsky V, Smith B, Wang Q, Zhang J, El-Sayed A, Wu CH. Natale DA, et al. Nucleic Acids Res. 2017 Jan 4;45(D1):D339-D346. doi: 10.1093/nar/gkw1075. Epub 2016 Nov 28. Nucleic Acids Res. 2017. PMID: 27899649 Free PMC article.
18 results