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Minian, an open-source miniscope analysis pipeline.
Dong Z, Mau W, Feng Y, Pennington ZT, Chen L, Zaki Y, Rajan K, Shuman T, Aharoni D, Cai DJ. Dong Z, et al. Elife. 2022 Jun 1;11:e70661. doi: 10.7554/eLife.70661. Elife. 2022. PMID: 35642786 Free PMC article.
ezTrack-A Step-by-Step Guide to Behavior Tracking.
Pennington ZT, Diego KS, Francisco TR, LaBanca AR, Lamsifer SI, Liobimova O, Shuman T, Cai DJ. Pennington ZT, et al. Curr Protoc. 2021 Oct;1(10):e255. doi: 10.1002/cpz1.255. Curr Protoc. 2021. PMID: 34610215 Free PMC article.
Breakdown of spatial coding and interneuron synchronization in epileptic mice.
Shuman T, Aharoni D, Cai DJ, Lee CR, Chavlis S, Page-Harley L, Vetere LM, Feng Y, Yang CY, Mollinedo-Gajate I, Chen L, Pennington ZT, Taxidis J, Flores SE, Cheng K, Javaherian M, Kaba CC, Rao N, La-Vu M, Pandi I, Shtrahman M, Bakhurin KI, Masmanidis SC, Khakh BS, Poirazi P, Silva AJ, Golshani P. Shuman T, et al. Nat Neurosci. 2020 Feb;23(2):229-238. doi: 10.1038/s41593-019-0559-0. Epub 2020 Jan 6. Nat Neurosci. 2020. PMID: 31907437 Free PMC article.
Aversive experience drives offline ensemble reactivation to link memories across days.
Zaki Y, Pennington ZT, Morales-Rodriguez D, Francisco TR, LaBanca AR, Dong Z, Lamsifer S, Segura SC, Chen HT, Wick ZC, Silva AJ, van der Meer M, Shuman T, Fenton A, Rajan K, Cai DJ. Zaki Y, et al. bioRxiv [Preprint]. 2023 Aug 19:2023.03.13.532469. doi: 10.1101/2023.03.13.532469. bioRxiv. 2023. Update in: Nature. 2024 Nov 6. doi: 10.1038/s41586-024-08168-4 PMID: 36993254 Free PMC article. Updated. Preprint.
12 results