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Molecular annotation of G protein variants in a neurological disorder.
Knight KM, Obarow EG, Wei W, Mani S, Esteller MI, Cui M, Ma N, Martin SA, Brinson E, Hewitt N, Soden GM, Logothetis DE, Vaidehi N, Dohlman HG. Knight KM, et al. Cell Rep. 2023 Dec 26;42(12):113462. doi: 10.1016/j.celrep.2023.113462. Epub 2023 Nov 18. Cell Rep. 2023. PMID: 37980565 Free PMC article.
A neurodevelopmental disorder mutation locks G proteins in the transitory pre-activated state.
Knight KM, Krumm BE, Kapolka NJ, Ludlam WG, Cui M, Mani S, Prytkova I, Obarow EG, Lefevre TJ, Wei W, Ma N, Huang XP, Fay JF, Vaidehi N, Smrcka AV, Slesinger PA, Logothetis DE, Martemyanov KA, Roth BL, Dohlman HG. Knight KM, et al. Nat Commun. 2024 Aug 5;15(1):6643. doi: 10.1038/s41467-024-50964-z. Nat Commun. 2024. PMID: 39103320 Free PMC article.
Bayesian network models identify co-operative GPCR:G protein interactions that contribute to G protein coupling.
Mukhaleva E, Ma N, van der Velden WJC, Gogoshin G, Branciamore S, Bhattacharya S, Rodin AS, Vaidehi N. Mukhaleva E, et al. bioRxiv [Preprint]. 2023 Oct 12:2023.10.09.561618. doi: 10.1101/2023.10.09.561618. bioRxiv. 2023. Update in: J Biol Chem. 2024 Jun;300(6):107362. doi: 10.1016/j.jbc.2024.107362 PMID: 37873104 Free PMC article. Updated. Preprint.
BaNDyT: Bayesian Network modeling of molecular Dynamics Trajectories.
Mukhaleva E, Manookian B, Chen H, Ma N, Wei W, Urbaniak K, Gogoshin G, Bhattacharya S, Vaidehi N, Rodin AS, Branciamore S. Mukhaleva E, et al. bioRxiv [Preprint]. 2024 Nov 8:2024.11.06.622318. doi: 10.1101/2024.11.06.622318. bioRxiv. 2024. PMID: 39574638 Free PMC article. Preprint.
Stabilization of Interdomain Interactions in G protein αi Subunits Determines Gαi Subtype Signaling Specificity.
Lefevre TJ, Wei W, Mukhaleva E, Venkata SPM, Chandan NR, Abraham S, Li Y, Dessauer CW, Vaidehi N, Smrcka AV. Lefevre TJ, et al. bioRxiv [Preprint]. 2023 Apr 6:2023.03.10.532072. doi: 10.1101/2023.03.10.532072. bioRxiv. 2023. Update in: J Biol Chem. 2024 May;300(5):107211. doi: 10.1016/j.jbc.2024.107211 PMID: 37066214 Free PMC article. Updated. Preprint.