R01 HG003903/HG/NHGRI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2008	4
2009	3
2010	4
2011	1
2012	2
2024	0

1

Modeling the spatio-temporal network that drives patterning in the vertebrate central nervous system.

Nishi Y, Ji H, Wong WH, McMahon AP, Vokes SA. Nishi Y, et al. Biochim Biophys Acta. 2009 Apr;1789(4):299-305. doi: 10.1016/j.bbagrm.2009.01.002. Biochim Biophys Acta. 2009. PMID: 19445894 Review.

2

Six2 and Wnt regulate self-renewal and commitment of nephron progenitors through shared gene regulatory networks.

Park JS, Ma W, O'Brien LL, Chung E, Guo JJ, Cheng JG, Valerius MT, McMahon JA, Wong WH, McMahon AP. Park JS, et al. Dev Cell. 2012 Sep 11;23(3):637-51. doi: 10.1016/j.devcel.2012.07.008. Epub 2012 Aug 16. Dev Cell. 2012. PMID: 22902740 Free PMC article.

3

An integrated software system for analyzing ChIP-chip and ChIP-seq data.

Ji H, Jiang H, Ma W, Johnson DS, Myers RM, Wong WH. Ji H, et al. Nat Biotechnol. 2008 Nov;26(11):1293-300. doi: 10.1038/nbt.1505. Epub 2008 Nov 2. Nat Biotechnol. 2008. PMID: 18978777 Free PMC article.

4

Completely phased genome sequencing through chromosome sorting.

Yang H, Chen X, Wong WH. Yang H, et al. Proc Natl Acad Sci U S A. 2011 Jan 4;108(1):12-7. doi: 10.1073/pnas.1016725108. Epub 2010 Dec 15. Proc Natl Acad Sci U S A. 2011. PMID: 21169219 Free PMC article.

5

ChIP-Seq of transcription factors predicts absolute and differential gene expression in embryonic stem cells.

Ouyang Z, Zhou Q, Wong WH. Ouyang Z, et al. Proc Natl Acad Sci U S A. 2009 Dec 22;106(51):21521-6. doi: 10.1073/pnas.0904863106. Epub 2009 Dec 7. Proc Natl Acad Sci U S A. 2009. PMID: 19995984 Free PMC article.

6

Statistical inferences for isoform expression in RNA-Seq.

Jiang H, Wong WH. Jiang H, et al. Bioinformatics. 2009 Apr 15;25(8):1026-32. doi: 10.1093/bioinformatics/btp113. Epub 2009 Feb 25. Bioinformatics. 2009. PMID: 19244387 Free PMC article.

7

Modeling non-uniformity in short-read rates in RNA-Seq data.

Li J, Jiang H, Wong WH. Li J, et al. Genome Biol. 2010;11(5):R50. doi: 10.1186/gb-2010-11-5-r50. Epub 2010 May 11. Genome Biol. 2010. PMID: 20459815 Free PMC article.

8

Hedgehog pathway-regulated gene networks in cerebellum development and tumorigenesis.

Lee EY, Ji H, Ouyang Z, Zhou B, Ma W, Vokes SA, McMahon AP, Wong WH, Scott MP. Lee EY, et al. Proc Natl Acad Sci U S A. 2010 May 25;107(21):9736-41. doi: 10.1073/pnas.1004602107. Epub 2010 May 11. Proc Natl Acad Sci U S A. 2010. PMID: 20460306 Free PMC article.

9

Sox17 promotes differentiation in mouse embryonic stem cells by directly regulating extraembryonic gene expression and indirectly antagonizing self-renewal.

Niakan KK, Ji H, Maehr R, Vokes SA, Rodolfa KT, Sherwood RI, Yamaki M, Dimos JT, Chen AE, Melton DA, McMahon AP, Eggan K. Niakan KK, et al. Genes Dev. 2010 Feb 1;24(3):312-26. doi: 10.1101/gad.1833510. Genes Dev. 2010. PMID: 20123909 Free PMC article.

10

Neural-specific Sox2 input and differential Gli-binding affinity provide context and positional information in Shh-directed neural patterning.

Peterson KA, Nishi Y, Ma W, Vedenko A, Shokri L, Zhang X, McFarlane M, Baizabal JM, Junker JP, van Oudenaarden A, Mikkelsen T, Bernstein BE, Bailey TL, Bulyk ML, Wong WH, McMahon AP. Peterson KA, et al. Genes Dev. 2012 Dec 15;26(24):2802-16. doi: 10.1101/gad.207142.112. Genes Dev. 2012. PMID: 23249739 Free PMC article.

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