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Page 1
Defining genetic interaction.
Mani R, St Onge RP, Hartman JL 4th, Giaever G, Roth FP. Mani R, et al. Proc Natl Acad Sci U S A. 2008 Mar 4;105(9):3461-6. doi: 10.1073/pnas.0712255105. Epub 2008 Feb 27. Proc Natl Acad Sci U S A. 2008. PMID: 18305163 Free PMC article.
Pathways of the heart.
Deo RC, Roth FP. Deo RC, et al. Circ Cardiovasc Genet. 2009 Aug;2(4):303-5. doi: 10.1161/CIRCGENETICS.109.892588. Circ Cardiovasc Genet. 2009. PMID: 20031600 Free PMC article. No abstract available.
Literature-curated protein interaction datasets.
Cusick ME, Yu H, Smolyar A, Venkatesan K, Carvunis AR, Simonis N, Rual JF, Borick H, Braun P, Dreze M, Vandenhaute J, Galli M, Yazaki J, Hill DE, Ecker JR, Roth FP, Vidal M. Cusick ME, et al. Nat Methods. 2009 Jan;6(1):39-46. doi: 10.1038/nmeth.1284. Nat Methods. 2009. PMID: 19116613 Free PMC article.
Genetic interaction screens advance in reverse.
Komili S, Roth FP. Komili S, et al. Genes Dev. 2007 Jan 15;21(2):137-42. doi: 10.1101/gad.1512707. Genes Dev. 2007. PMID: 17234880 Free article. No abstract available.
An experimentally derived confidence score for binary protein-protein interactions.
Braun P, Tasan M, Dreze M, Barrios-Rodiles M, Lemmens I, Yu H, Sahalie JM, Murray RR, Roncari L, de Smet AS, Venkatesan K, Rual JF, Vandenhaute J, Cusick ME, Pawson T, Hill DE, Tavernier J, Wrana JL, Roth FP, Vidal M. Braun P, et al. Nat Methods. 2009 Jan;6(1):91-7. doi: 10.1038/nmeth.1281. Epub 2008 Dec 7. Nat Methods. 2009. PMID: 19060903 Free PMC article.
Isoform discovery by targeted cloning, 'deep-well' pooling and parallel sequencing.
Salehi-Ashtiani K, Yang X, Derti A, Tian W, Hao T, Lin C, Makowski K, Shen L, Murray RR, Szeto D, Tusneem N, Smith DR, Cusick ME, Hill DE, Roth FP, Vidal M. Salehi-Ashtiani K, et al. Nat Methods. 2008 Jul;5(7):597-600. doi: 10.1038/nmeth.1224. Epub 2008 Jun 15. Nat Methods. 2008. PMID: 18552854 Free PMC article.
Systematic genetics swims forward elegantly.
Suzuki Y, Roth FP. Suzuki Y, et al. Mol Syst Biol. 2006;2:48. doi: 10.1038/msb4100092. Epub 2006 Sep 12. Mol Syst Biol. 2006. PMID: 16969340 Free PMC article. No abstract available.