R01 CA179243/CA/NCI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2014	5
2015	5
2016	13
2017	12
2018	9
2019	7
2020	7
2021	3
2025	0

1

Fecal Metabolomic Signatures in Colorectal Adenoma Patients Are Associated with Gut Microbiota and Early Events of Colorectal Cancer Pathogenesis.

Kim M, Vogtmann E, Ahlquist DA, Devens ME, Kisiel JB, Taylor WR, White BA, Hale VL, Sung J, Chia N, Sinha R, Chen J. Kim M, et al. mBio. 2020 Feb 18;11(1):e03186-19. doi: 10.1128/mBio.03186-19. mBio. 2020. PMID: 32071266 Free PMC article.

2

Metabolic modeling with Big Data and the gut microbiome.

Sung J, Hale V, Merkel AC, Kim PJ, Chia N. Sung J, et al. Appl Transl Genom. 2016 Feb 5;10:10-5. doi: 10.1016/j.atg.2016.02.001. eCollection 2016 Sep. Appl Transl Genom. 2016. PMID: 27668170 Free PMC article. Review.

3

Mackinac: a bridge between ModelSEED and COBRApy to generate and analyze genome-scale metabolic models.

Mundy M, Mendes-Soares H, Chia N. Mundy M, et al. Bioinformatics. 2017 Aug 1;33(15):2416-2418. doi: 10.1093/bioinformatics/btx185. Bioinformatics. 2017. PMID: 28379466 Free PMC article.

4

The role of microbiome in pancreatic cancer.

Li JJ, Zhu M, Kashyap PC, Chia N, Tran NH, McWilliams RR, Bekaii-Saab TS, Ma WW. Li JJ, et al. Cancer Metastasis Rev. 2021 Sep;40(3):777-789. doi: 10.1007/s10555-021-09982-2. Epub 2021 Aug 28. Cancer Metastasis Rev. 2021. PMID: 34455517 Free PMC article. Review.

5

Comparison of Three Commercial Tools for Metagenomic Shotgun Sequencing Analysis.

Thoendel M, Jeraldo P, Greenwood-Quaintance KE, Yao J, Chia N, Hanssen AD, Abdel MP, Patel R. Thoendel M, et al. J Clin Microbiol. 2020 Feb 24;58(3):e00981-19. doi: 10.1128/JCM.00981-19. Print 2020 Feb 24. J Clin Microbiol. 2020. PMID: 31826963 Free PMC article.

6

Microbiome at the Frontier of Personalized Medicine.

Kashyap PC, Chia N, Nelson H, Segal E, Elinav E. Kashyap PC, et al. Mayo Clin Proc. 2017 Dec;92(12):1855-1864. doi: 10.1016/j.mayocp.2017.10.004. Mayo Clin Proc. 2017. PMID: 29202942 Free PMC article. Review.

7

IM-TORNADO: a tool for comparison of 16S reads from paired-end libraries.

Jeraldo P, Kalari K, Chen X, Bhavsar J, Mangalam A, White B, Nelson H, Kocher JP, Chia N. Jeraldo P, et al. PLoS One. 2014 Dec 15;9(12):e114804. doi: 10.1371/journal.pone.0114804. eCollection 2014. PLoS One. 2014. PMID: 25506826 Free PMC article.

8

Minimizing the number of optimizations for efficient community dynamic flux balance analysis.

Brunner JD, Chia N. Brunner JD, et al. PLoS Comput Biol. 2020 Sep 29;16(9):e1007786. doi: 10.1371/journal.pcbi.1007786. eCollection 2020 Sep. PLoS Comput Biol. 2020. PMID: 32991583 Free PMC article.

9

Identification of Prosthetic Joint Infection Pathogens Using a Shotgun Metagenomics Approach.

Thoendel MJ, Jeraldo PR, Greenwood-Quaintance KE, Yao JZ, Chia N, Hanssen AD, Abdel MP, Patel R. Thoendel MJ, et al. Clin Infect Dis. 2018 Oct 15;67(9):1333-1338. doi: 10.1093/cid/ciy303. Clin Infect Dis. 2018. PMID: 29648630 Free PMC article.

10

Fecal Microbiome in Epidemiologic Studies-Response.

Sinha R, Vogtmann E, Chen J, Amir A, Shi J, Sampson J, Flores R, Knight R, Chia N. Sinha R, et al. Cancer Epidemiol Biomarkers Prev. 2016 May;25(5):870-1. doi: 10.1158/1055-9965.EPI-16-0161. Epub 2016 Mar 9. Cancer Epidemiol Biomarkers Prev. 2016. PMID: 26961994 Free PMC article. No abstract available.

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