Sarai A - Search Results

1

Thermodynamics of specific and non-specific DNA binding by the c-Myb DNA-binding domain.

Oda M, Furukawa K, Ogata K, Sarai A, Nakamura H. Oda M, et al. Among authors: sarai a. J Mol Biol. 1998 Feb 27;276(3):571-90. doi: 10.1006/jmbi.1997.1564. J Mol Biol. 1998. PMID: 9551098

2

Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.

Ogata K, Morikawa S, Nakamura H, Hojo H, Yoshimura S, Zhang R, Aimoto S, Ametani Y, Hirata Z, Sarai A, et al. Ogata K, et al. Among authors: sarai a. Nat Struct Biol. 1995 Apr;2(4):309-20. doi: 10.1038/nsb0495-309. Nat Struct Biol. 1995. PMID: 7796266

3

Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices.

Ogata K, Morikawa S, Nakamura H, Sekikawa A, Inoue T, Kanai H, Sarai A, Ishii S, Nishimura Y. Ogata K, et al. Among authors: sarai a. Cell. 1994 Nov 18;79(4):639-48. doi: 10.1016/0092-8674(94)90549-5. Cell. 1994. PMID: 7954830

4

Determination of the NMR solution structure of a specific DNA complex of the Myb DNA-binding domain.

Morikawa S, Ogata K, Sekikawa A, Sarai A, Ishii S, Nishimura Y, Nakamura H. Morikawa S, et al. Among authors: sarai a. J Biomol NMR. 1995 Nov;6(3):294-305. doi: 10.1007/BF00197810. J Biomol NMR. 1995. PMID: 8520221

5

The cavity in the hydrophobic core of Myb DNA-binding domain is reserved for DNA recognition and trans-activation.

Ogata K, Kanei-Ishii C, Sasaki M, Hatanaka H, Nagadoi A, Enari M, Nakamura H, Nishimura Y, Ishii S, Sarai A. Ogata K, et al. Among authors: sarai a. Nat Struct Biol. 1996 Feb;3(2):178-87. doi: 10.1038/nsb0296-178. Nat Struct Biol. 1996. PMID: 8564545

6

Investigation of the pyrimidine preference by the c-Myb DNA-binding domain at the initial base of the consensus sequence.

Oda M, Furukawa K, Ogata K, Sarai A, Ishii S, Nishimura Y, Nakamura H. Oda M, et al. Among authors: sarai a. J Biol Chem. 1997 Jul 18;272(29):17966-71. doi: 10.1074/jbc.272.29.17966. J Biol Chem. 1997. PMID: 9218422 Free article.

7

Identification of indispensable residues for specific DNA-binding in the imperfect tandem repeats of c-Myb R2R3.

Oda M, Furukawa K, Ogata K, Sarai A, Ishii S, Nishimura Y, Nakamura H. Oda M, et al. Among authors: sarai a. Protein Eng. 1997 Dec;10(12):1407-14. doi: 10.1093/protein/10.12.1407. Protein Eng. 1997. PMID: 9543002

8

Kinetic analysis of DNA binding by the c-Myb DNA-binding domain using surface plasmon resonance.

Oda M, Furukawa K, Sarai A, Nakamura H. Oda M, et al. Among authors: sarai a. FEBS Lett. 1999 Jul 9;454(3):288-92. doi: 10.1016/s0014-5793(99)00833-9. FEBS Lett. 1999. PMID: 10431824 Free article.

9

Construction of an artificial tandem protein of the c-Myb DNA-binding domain and analysis of its DNA binding specificity.

Oda M, Furukawa K, Sarai A, Nakamura H. Oda M, et al. Among authors: sarai a. Biochem Biophys Res Commun. 1999 Aug 19;262(1):94-7. doi: 10.1006/bbrc.1999.1159. Biochem Biophys Res Commun. 1999. PMID: 10448074

10

Shape and energetics of a cavity in c-Myb probed by natural and non-natural amino acid mutations.

Morii H, Uedaira H, Ogata K, Ishii S, Sarai A. Morii H, et al. Among authors: sarai a. J Mol Biol. 1999 Oct 1;292(4):909-20. doi: 10.1006/jmbi.1999.3099. J Mol Biol. 1999. PMID: 10525414

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