Nei M - Search Results

1

Four-cluster analysis: a simple method to test phylogenetic hypotheses.

Rzhetsky A, Kumar S, Nei M. Rzhetsky A, et al. Among authors: nei m. Mol Biol Evol. 1995 Jan;12(1):163-7. doi: 10.1093/oxfordjournals.molbev.a040185. Mol Biol Evol. 1995. PMID: 7877491

2

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.

Tamura K, Dudley J, Nei M, Kumar S. Tamura K, et al. Among authors: nei m. Mol Biol Evol. 2007 Aug;24(8):1596-9. doi: 10.1093/molbev/msm092. Epub 2007 May 7. Mol Biol Evol. 2007. PMID: 17488738

3

The Reliability and Stability of an Inferred Phylogenetic Tree from Empirical Data.

Katsura Y, Stanley CE Jr, Kumar S, Nei M. Katsura Y, et al. Among authors: nei m. Mol Biol Evol. 2017 Mar 1;34(3):718-723. doi: 10.1093/molbev/msw272. Mol Biol Evol. 2017. PMID: 28100791 Free PMC article.

4

Phylogenetic test of the molecular clock and linearized trees.

Takezaki N, Rzhetsky A, Nei M. Takezaki N, et al. Among authors: nei m. Mol Biol Evol. 1995 Sep;12(5):823-33. doi: 10.1093/oxfordjournals.molbev.a040259. Mol Biol Evol. 1995. PMID: 7476128

5

Interior-branch and bootstrap tests of phylogenetic trees.

Sitnikova T, Rzhetsky A, Nei M. Sitnikova T, et al. Among authors: nei m. Mol Biol Evol. 1995 Mar;12(2):319-33. doi: 10.1093/oxfordjournals.molbev.a040205. Mol Biol Evol. 1995. PMID: 7700156

6

METREE: a program package for inferring and testing minimum-evolution trees.

Rzhetsky A, Nei M. Rzhetsky A, et al. Among authors: nei m. Comput Appl Biosci. 1994 Jul;10(4):409-12. doi: 10.1093/bioinformatics/10.4.409. Comput Appl Biosci. 1994. PMID: 7804873

7

Tests of applicability of several substitution models for DNA sequence data.

Rzhetsky A, Nei M. Rzhetsky A, et al. Among authors: nei m. Mol Biol Evol. 1995 Jan;12(1):131-51. doi: 10.1093/oxfordjournals.molbev.a040182. Mol Biol Evol. 1995. PMID: 7877488

8

Unbiased estimates of the number of nucleotide substitutions when substitution rate varies among different sites.

Rzhetsky A, Nei M. Rzhetsky A, et al. Among authors: nei m. J Mol Evol. 1994 Mar;38(3):295-9. doi: 10.1007/BF00176091. J Mol Evol. 1994. PMID: 8006996

9

Theoretical foundation of the minimum-evolution method of phylogenetic inference.

Rzhetsky A, Nei M. Rzhetsky A, et al. Among authors: nei m. Mol Biol Evol. 1993 Sep;10(5):1073-95. doi: 10.1093/oxfordjournals.molbev.a040056. Mol Biol Evol. 1993. PMID: 8412650

10

The optimization principle in phylogenetic analysis tends to give incorrect topologies when the number of nucleotides or amino acids used is small.

Nei M, Kumar S, Takahashi K. Nei M, et al. Proc Natl Acad Sci U S A. 1998 Oct 13;95(21):12390-7. doi: 10.1073/pnas.95.21.12390. Proc Natl Acad Sci U S A. 1998. PMID: 9770497 Free PMC article.

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