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Page 1
Gut microbiome signatures of vegan, vegetarian and omnivore diets and associated health outcomes across 21,561 individuals.
Fackelmann G, Manghi P, Carlino N, Heidrich V, Piccinno G, Ricci L, Piperni E, Arrè A, Bakker E, Creedon AC, Francis L, Capdevila Pujol J, Davies R, Wolf J, Bermingham KM, Berry SE, Spector TD, Asnicar F, Segata N. Fackelmann G, et al. Among authors: berry se. Nat Microbiol. 2025 Jan;10(1):41-52. doi: 10.1038/s41564-024-01870-z. Epub 2025 Jan 6. Nat Microbiol. 2025. PMID: 39762435 Free PMC article.
Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals.
Asnicar F, Berry SE, Valdes AM, Nguyen LH, Piccinno G, Drew DA, Leeming E, Gibson R, Le Roy C, Khatib HA, Francis L, Mazidi M, Mompeo O, Valles-Colomer M, Tett A, Beghini F, Dubois L, Bazzani D, Thomas AM, Mirzayi C, Khleborodova A, Oh S, Hine R, Bonnett C, Capdevila J, Danzanvilliers S, Giordano F, Geistlinger L, Waldron L, Davies R, Hadjigeorgiou G, Wolf J, Ordovás JM, Gardner C, Franks PW, Chan AT, Huttenhower C, Spector TD, Segata N. Asnicar F, et al. Among authors: berry se. Nat Med. 2021 Feb;27(2):321-332. doi: 10.1038/s41591-020-01183-8. Epub 2021 Jan 11. Nat Med. 2021. PMID: 33432175 Free PMC article. Clinical Trial.
Blue poo: impact of gut transit time on the gut microbiome using a novel marker.
Asnicar F, Leeming ER, Dimidi E, Mazidi M, Franks PW, Al Khatib H, Valdes AM, Davies R, Bakker E, Francis L, Chan A, Gibson R, Hadjigeorgiou G, Wolf J, Spector TD, Segata N, Berry SE. Asnicar F, et al. Among authors: berry se. Gut. 2021 Sep;70(9):1665-1674. doi: 10.1136/gutjnl-2020-323877. Epub 2021 Mar 15. Gut. 2021. PMID: 33722860 Free PMC article.
Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4.
Blanco-Míguez A, Beghini F, Cumbo F, McIver LJ, Thompson KN, Zolfo M, Manghi P, Dubois L, Huang KD, Thomas AM, Nickols WA, Piccinno G, Piperni E, Punčochář M, Valles-Colomer M, Tett A, Giordano F, Davies R, Wolf J, Berry SE, Spector TD, Franzosa EA, Pasolli E, Asnicar F, Huttenhower C, Segata N. Blanco-Míguez A, et al. Among authors: berry se. Nat Biotechnol. 2023 Nov;41(11):1633-1644. doi: 10.1038/s41587-023-01688-w. Epub 2023 Feb 23. Nat Biotechnol. 2023. PMID: 36823356 Free PMC article.
Intestinal Blastocystis is linked to healthier diets and more favorable cardiometabolic outcomes in 56,989 individuals from 32 countries.
Piperni E, Nguyen LH, Manghi P, Kim H, Pasolli E, Andreu-Sánchez S, Arrè A, Bermingham KM, Blanco-Míguez A, Manara S, Valles-Colomer M, Bakker E, Busonero F, Davies R, Fiorillo E, Giordano F, Hadjigeorgiou G, Leeming ER, Lobina M, Masala M, Maschio A, McIver LJ, Pala M, Pitzalis M, Wolf J, Fu J, Zhernakova A, Cacciò SM, Cucca F, Berry SE, Ercolini D, Chan AT, Huttenhower C, Spector TD, Segata N, Asnicar F. Piperni E, et al. Among authors: berry se. Cell. 2024 Aug 22;187(17):4554-4570.e18. doi: 10.1016/j.cell.2024.06.018. Epub 2024 Jul 8. Cell. 2024. PMID: 38981480 Free article.
Coffee consumption is associated with intestinal Lawsonibacter asaccharolyticus abundance and prevalence across multiple cohorts.
Manghi P, Bhosle A, Wang K, Marconi R, Selma-Royo M, Ricci L, Asnicar F, Golzato D, Ma W, Hang D, Thompson KN, Franzosa EA, Nabinejad A, Tamburini S, Rimm EB, Garrett WS, Sun Q, Chan AT, Valles-Colomer M, Arumugam M, Bermingham KM, Giordano F, Davies R, Hadjigeorgiou G, Wolf J, Strowig T, Berry SE, Huttenhower C, Spector TD, Segata N, Song M. Manghi P, et al. Among authors: berry se. Nat Microbiol. 2024 Dec;9(12):3120-3134. doi: 10.1038/s41564-024-01858-9. Epub 2024 Nov 18. Nat Microbiol. 2024. PMID: 39558133 Free PMC article.
Human postprandial responses to food and potential for precision nutrition.
Berry SE, Valdes AM, Drew DA, Asnicar F, Mazidi M, Wolf J, Capdevila J, Hadjigeorgiou G, Davies R, Al Khatib H, Bonnett C, Ganesh S, Bakker E, Hart D, Mangino M, Merino J, Linenberg I, Wyatt P, Ordovas JM, Gardner CD, Delahanty LM, Chan AT, Segata N, Franks PW, Spector TD. Berry SE, et al. Nat Med. 2020 Jun;26(6):964-973. doi: 10.1038/s41591-020-0934-0. Epub 2020 Jun 11. Nat Med. 2020. PMID: 32528151 Free PMC article.
107 results