Huson DH - Search Results

1

Corrigendum: Interplay of various evolutionary modes in genome diversification and adaptive evolution of the family Sulfolobaceae.

Banerjee R, Chaudhari NM, Lahiri A, Gautam A, Bhowmik D, Dutta C, Chattopadhyay S, Huson DH, Paul S. Banerjee R, et al. Among authors: huson dh. Front Microbiol. 2024 Dec 16;15:1538738. doi: 10.3389/fmicb.2024.1538738. eCollection 2024. Front Microbiol. 2024. PMID: 39741590 Free PMC article.

2

MeganServer: facilitating interactive access to metagenomic data on a server.

Gautam A, Zeng W, Huson DH. Gautam A, et al. Among authors: huson dh. Bioinformatics. 2023 Mar 1;39(3):btad105. doi: 10.1093/bioinformatics/btad105. Bioinformatics. 2023. PMID: 36825821 Free PMC article.

3

DIAMOND + MEGAN Microbiome Analysis.

Gautam A, Zeng W, Huson DH. Gautam A, et al. Among authors: huson dh. Methods Mol Biol. 2023;2649:107-131. doi: 10.1007/978-1-0716-3072-3_6. Methods Mol Biol. 2023. PMID: 37258860

4

Easy efficient HDR-based targeted knock-in in Saccharomyces cerevisiae genome using CRISPR-Cas9 system.

Singh R, Chandel S, Ghosh A, Gautam A, Huson DH, Ravichandiran V, Ghosh D. Singh R, et al. Among authors: huson dh. Bioengineered. 2022 Jun;13(6):14857-14871. doi: 10.1080/21655979.2022.2162667. Bioengineered. 2022. PMID: 36602175 Free PMC article.

5

NeighborNet: improved algorithms and implementation.

Bryant D, Huson DH. Bryant D, et al. Among authors: huson dh. Front Bioinform. 2023 Sep 20;3:1178600. doi: 10.3389/fbinf.2023.1178600. eCollection 2023. Front Bioinform. 2023. PMID: 37799982 Free PMC article.

6

Visualizing incompatibilities in phylogenetic trees using consensus outlines.

Huson DH, Cetinkaya B. Huson DH, et al. Front Bioinform. 2023 Jun 1;3:1155286. doi: 10.3389/fbinf.2023.1155286. eCollection 2023. Front Bioinform. 2023. PMID: 37325772 Free PMC article.

7

An integrated systems biology approach reveals differences in formate metabolism in the genus Methanothermobacter.

Casini I, McCubbin T, Esquivel-Elizondo S, Luque GG, Evseeva D, Fink C, Beblawy S, Youngblut ND, Aristilde L, Huson DH, Dräger A, Ley RE, Marcellin E, Angenent LT, Molitor B. Casini I, et al. Among authors: huson dh. iScience. 2023 Sep 22;26(10):108016. doi: 10.1016/j.isci.2023.108016. eCollection 2023 Oct 20. iScience. 2023. PMID: 37854702 Free PMC article.

8

Self-generating autocatalytic networks: structural results, algorithms and their relevance to early biochemistry.

Huson D, Xavier JC, Steel M. Huson D, et al. J R Soc Interface. 2024 May;21(214):20230732. doi: 10.1098/rsif.2023.0732. Epub 2024 May 22. J R Soc Interface. 2024. PMID: 38774958 Free PMC article.

9

Transformations to Simplify Phylogenetic Networks.

Heiss J, Huson DH, Steel M. Heiss J, et al. Among authors: huson dh. Bull Math Biol. 2025 Jan 3;87(2):20. doi: 10.1007/s11538-024-01398-7. Bull Math Biol. 2025. PMID: 39752084

10

Variability in n-caprylate and n-caproate producing microbiomes in reactors with in-line product extraction.

Spirito CM, Lucas TN, Patz S, Jeon BS, Werner JJ, Trondsen LH, Guzman JJ, Huson DH, Angenent LT. Spirito CM, et al. Among authors: huson dh. mSystems. 2024 Aug 20;9(8):e0041624. doi: 10.1128/msystems.00416-24. Epub 2024 Jul 11. mSystems. 2024. PMID: 38990071 Free PMC article.

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