Abriata LA - Search Results

1

MolecularWebXR: Multiuser discussions in chemistry and biology through immersive and inclusive augmented and virtual reality.

Cortés Rodríguez FJ, Frattini G, Phloi-Montri S, Pinto Meireles FT, Terrien DA, Cruz-León S, Dal Peraro M, Schier E, Lindorff-Larsen K, Limpanuparb T, Moreno DM, Abriata LA. Cortés Rodríguez FJ, et al. Among authors: abriata la. J Mol Graph Model. 2025 Mar;135:108932. doi: 10.1016/j.jmgm.2024.108932. Epub 2024 Dec 20. J Mol Graph Model. 2025. PMID: 39719805 Free article.

2

Online tools to easily build virtual molecular models for display in augmented and virtual reality on the web.

Cortés Rodríguez F, Dal Peraro M, Abriata LA. Cortés Rodríguez F, et al. Among authors: abriata la. J Mol Graph Model. 2022 Jul;114:108164. doi: 10.1016/j.jmgm.2022.108164. Epub 2022 Mar 17. J Mol Graph Model. 2022. PMID: 35325844 Free article.

3

Will Cryo-Electron Microscopy Shift the Current Paradigm in Protein Structure Prediction?

Abriata LA, Dal Peraro M. Abriata LA, et al. J Chem Inf Model. 2020 May 26;60(5):2443-2447. doi: 10.1021/acs.jcim.0c00177. Epub 2020 Mar 18. J Chem Inf Model. 2020. PMID: 32134661

4

State-of-the-art web services for de novo protein structure prediction.

Abriata LA, Dal Peraro M. Abriata LA, et al. Brief Bioinform. 2021 May 20;22(3):bbaa139. doi: 10.1093/bib/bbaa139. Brief Bioinform. 2021. PMID: 34020540 Review.

5

Assessment of transferable forcefields for protein simulations attests improved description of disordered states and secondary structure propensities, and hints at multi-protein systems as the next challenge for optimization.

Abriata LA, Dal Peraro M. Abriata LA, et al. Comput Struct Biotechnol J. 2021 Apr 25;19:2626-2636. doi: 10.1016/j.csbj.2021.04.050. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34025949 Free PMC article.

6

Democratizing interactive, immersive experiences for science education with WebXR.

Rodríguez FC, Dal Peraro M, Abriata LA. Rodríguez FC, et al. Among authors: abriata la. Nat Comput Sci. 2021 Oct;1(10):631-632. doi: 10.1038/s43588-021-00142-8. Nat Comput Sci. 2021. PMID: 38217192 No abstract available.

7

Assessing the potential of atomistic molecular dynamics simulations to probe reversible protein-protein recognition and binding.

Abriata LA, Dal Peraro M. Abriata LA, et al. Sci Rep. 2015 May 29;5:10549. doi: 10.1038/srep10549. Sci Rep. 2015. PMID: 26023027 Free PMC article.

8

Detection and sequence/structure mapping of biophysical constraints to protein variation in saturated mutational libraries and protein sequence alignments with a dedicated server.

Abriata LA, Bovigny C, Dal Peraro M. Abriata LA, et al. BMC Bioinformatics. 2016 Jun 17;17(1):242. doi: 10.1186/s12859-016-1124-4. BMC Bioinformatics. 2016. PMID: 27315797 Free PMC article.

9

PeSTo: parameter-free geometric deep learning for accurate prediction of protein binding interfaces.

Krapp LF, Abriata LA, Cortés Rodriguez F, Dal Peraro M. Krapp LF, et al. Among authors: abriata la. Nat Commun. 2023 Apr 18;14(1):2175. doi: 10.1038/s41467-023-37701-8. Nat Commun. 2023. PMID: 37072397 Free PMC article.

10

All-atom simulations of crowding effects on ubiquitin dynamics.

Abriata LA, Spiga E, Dal Peraro M. Abriata LA, et al. Phys Biol. 2013 Aug;10(4):045006. doi: 10.1088/1478-3975/10/4/045006. Epub 2013 Aug 2. Phys Biol. 2013. PMID: 23911977

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

86 results

Search Page

Filters