Chowdhury SM - Search Results

1

Selective labeling of tyrosine residues in proteins: insights from PTAD labeling and tandem mass spectrometry analysis.

Zacharias AO, Cornelius S, Chowdhury SM. Zacharias AO, et al. Among authors: chowdhury sm. Mol Omics. 2024 Dec 24. doi: 10.1039/d4mo00186a. Online ahead of print. Mol Omics. 2024. PMID: 39717905

2

Affinity and chemical enrichment strategies for mapping low-abundance protein modifications and protein-interaction networks.

Zacharias AO, Fang Z, Rahman A, Talukder A, Cornelius S, Chowdhury SM. Zacharias AO, et al. Among authors: chowdhury sm. J Sep Sci. 2021 Jan;44(1):310-322. doi: 10.1002/jssc.202000930. Epub 2020 Dec 14. J Sep Sci. 2021. PMID: 33289315 Review.

3

Protein-Protein Interaction Network Mapping by Affinity Purification Cross-Linking Mass Spectrometry (AP-XL-MS) based Proteomics.

Mehta A, Kamal AHM, Cornelius S, Chowdhury SM. Mehta A, et al. Among authors: chowdhury sm. Methods Mol Biol. 2023;2690:255-267. doi: 10.1007/978-1-0716-3327-4_22. Methods Mol Biol. 2023. PMID: 37450153

4

Evaluation of chemical labeling methods for identifying functional arginine residues of proteins by mass spectrometry.

Wanigasekara MS, Chowdhury SM. Wanigasekara MS, et al. Among authors: chowdhury sm. Anal Chim Acta. 2016 Sep 7;935:197-206. doi: 10.1016/j.aca.2016.06.051. Epub 2016 Jul 2. Anal Chim Acta. 2016. PMID: 27543028

5

Lipopolysaccharide and statin-mediated immune-responsive protein networks revealed in macrophages through affinity purification spacer-arm controlled cross-linking (AP-SPACC) proteomics.

Kamal AHM, Chakrabarty JK, Chowdhury SM. Kamal AHM, et al. Among authors: chowdhury sm. Mol Omics. 2023 Jan 16;19(1):48-59. doi: 10.1039/d2mo00224h. Mol Omics. 2023. PMID: 36377691

6

Arginine-Selective Chemical Labeling Approach for Identification and Enrichment of Reactive Arginine Residues in Proteins.

Wanigasekara MSK, Huang X, Chakrabarty JK, Bugarin A, Chowdhury SM. Wanigasekara MSK, et al. Among authors: chowdhury sm. ACS Omega. 2018 Oct 26;3(10):14229-14235. doi: 10.1021/acsomega.8b01729. eCollection 2018 Oct 31. ACS Omega. 2018. PMID: 31458113 Free PMC article.

7

Solid-phase N-terminal peptide enrichment study by optimizing trypsin proteolysis on homoarginine-modified proteins by mass spectrometry.

Chowdhury SM, Munske GR, Yang J, Zhukova D, Nguyen H, Bruce JE. Chowdhury SM, et al. Rapid Commun Mass Spectrom. 2014 Mar 30;28(6):635-44. doi: 10.1002/rcm.6820. Rapid Commun Mass Spectrom. 2014. PMID: 24519826 Free PMC article.

8

Gas-Phase Fragmentation Behavior of Oxidized Prenyl Peptides by CID and ETD Tandem Mass Spectrometry.

Bhawal RP, Shahinuzzaman AD, Chowdhury SM. Bhawal RP, et al. Among authors: chowdhury sm. J Am Soc Mass Spectrom. 2017 Apr;28(4):704-707. doi: 10.1007/s13361-016-1503-0. Epub 2016 Oct 26. J Am Soc Mass Spectrom. 2017. PMID: 27785692

9

Dual-Stage Neutral Loss Tandem Mass Spectrometric Strategy for Confident Identification of Protein Prenylation.

Fang Z, Chowdhury SM. Fang Z, et al. Among authors: chowdhury sm. Anal Chem. 2021 Oct 5;93(39):13169-13176. doi: 10.1021/acs.analchem.1c01617. Epub 2021 Sep 24. Anal Chem. 2021. PMID: 34558911

10

Mass Spectrometry-Cleavable Protein N-Terminal Tagging Strategy for System-Level Protease Activity Profiling.

Fang Z, Wanigasekara MSK, Yepremyan A, Lam B, Thapa P, Foss FW Jr, Chowdhury SM. Fang Z, et al. Among authors: chowdhury sm. J Am Soc Mass Spectrom. 2022 Jan 5;33(1):189-197. doi: 10.1021/jasms.1c00350. Epub 2021 Dec 20. J Am Soc Mass Spectrom. 2022. PMID: 34928623

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