Ning L - Search Results

1

PlantEMS: A Comprehensive Database of Epigenetic Modification Sites Across Multiple Plant Species.

Dao F, Xie X, Zhang H, Guan Z, Wu C, Su W, Wei Y, Hong F, Luo X, Xie S, Lai H, Gao D, Yang Y, Zhang Y, Ning L, Li S, Hao Y, Lebeau B, Chia Yin CL, Huang J, Fullwood MJ, Lin H, Lv H. Dao F, et al. Among authors: ning l. Plant Commun. 2024 Dec 20:101228. doi: 10.1016/j.xplc.2024.101228. Online ahead of print. Plant Commun. 2024. PMID: 39709521 Free article. No abstract available.

2

Cm-siRPred: Predicting chemically modified siRNA efficiency based on multi-view learning strategy.

Liu T, Huang J, Luo D, Ren L, Ning L, Huang J, Lin H, Zhang Y. Liu T, et al. Among authors: ning l. Int J Biol Macromol. 2024 Apr;264(Pt 2):130638. doi: 10.1016/j.ijbiomac.2024.130638. Epub 2024 Mar 7. Int J Biol Macromol. 2024. PMID: 38460652

3

Attention is all you need: utilizing attention in AI-enabled drug discovery.

Zhang Y, Liu C, Liu M, Liu T, Lin H, Huang CB, Ning L. Zhang Y, et al. Among authors: ning l. Brief Bioinform. 2023 Nov 22;25(1):bbad467. doi: 10.1093/bib/bbad467. Brief Bioinform. 2023. PMID: 38189543 Free PMC article. Review.

4

Applications of single‑cell omics and spatial transcriptomics technologies in gastric cancer (Review).

Ren L, Huang D, Liu H, Ning L, Cai P, Yu X, Zhang Y, Luo N, Lin H, Su J, Zhang Y. Ren L, et al. Among authors: ning l. Oncol Lett. 2024 Feb 14;27(4):152. doi: 10.3892/ol.2024.14285. eCollection 2024 Apr. Oncol Lett. 2024. PMID: 38406595 Free PMC article. Review.

5

MCSdb, a database of proteins residing in membrane contact sites.

Pan X, Ren L, Yang Y, Xu Y, Ning L, Zhang Y, Luo H, Zou Q, Zhang Y. Pan X, et al. Among authors: ning l. Sci Data. 2024 Mar 8;11(1):281. doi: 10.1038/s41597-024-03104-7. Sci Data. 2024. PMID: 38459036 Free PMC article.

6

siRNAEfficacyDB: An experimentally supported small interfering RNA efficacy database.

Zhang Y, Yang T, Yang Y, Xu D, Hu Y, Zhang S, Luo N, Ning L, Ren L. Zhang Y, et al. Among authors: ning l. IET Syst Biol. 2024 Dec;18(6):199-207. doi: 10.1049/syb2.12102. Epub 2024 Nov 14. IET Syst Biol. 2024. PMID: 39541343 Free PMC article.

7

MetaboliteCOVID: A manually curated database of metabolite markers for COVID-19.

Ren L, Ning L, Yang Y, Yang T, Li X, Tan S, Ge P, Li S, Luo N, Tao P, Zhang Y. Ren L, et al. Among authors: ning l. Comput Biol Med. 2023 Dec;167:107661. doi: 10.1016/j.compbiomed.2023.107661. Epub 2023 Nov 1. Comput Biol Med. 2023. PMID: 37925911

8

Identification of RNA‐dependent liquid‐liquid phase separation proteins using an artificial intelligence strategy.

Ahmed Z, Shahzadi K, Jin Y, Li R, Momanyi BM, Zulfiqar H, Ning L, Lin H. Ahmed Z, et al. Among authors: ning l. Proteomics. 2024 Nov;24(21-22):e2400044. doi: 10.1002/pmic.202400044. Epub 2024 Jun 2. Proteomics. 2024. PMID: 38824664 French.

9

A protein pre-trained model-based approach for the identification of the liquid-liquid phase separation (LLPS) proteins.

Ahmed Z, Shahzadi K, Temesgen SA, Ahmad B, Chen X, Ning L, Zulfiqar H, Lin H, Jin YT. Ahmed Z, et al. Among authors: ning l. Int J Biol Macromol. 2024 Oct;277(Pt 4):134146. doi: 10.1016/j.ijbiomac.2024.134146. Epub 2024 Jul 26. Int J Biol Macromol. 2024. PMID: 39067723

10

SAGESDA: Multi-GraphSAGE networks for predicting SnoRNA-disease associations.

Momanyi BM, Zhou YW, Grace-Mercure BK, Temesgen SA, Basharat A, Ning L, Tang L, Gao H, Lin H, Tang H. Momanyi BM, et al. Among authors: ning l. Curr Res Struct Biol. 2023 Dec 29;7:100122. doi: 10.1016/j.crstbi.2023.100122. eCollection 2024. Curr Res Struct Biol. 2023. PMID: 38188542 Free PMC article.

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