Dao F - Search Results

1

PlantEMS: A Comprehensive Database of Epigenetic Modification Sites Across Multiple Plant Species.

Dao F, Xie X, Zhang H, Guan Z, Wu C, Su W, Wei Y, Hong F, Luo X, Xie S, Lai H, Gao D, Yang Y, Zhang Y, Ning L, Li S, Hao Y, Lebeau B, Chia Yin CL, Huang J, Fullwood MJ, Lin H, Lv H. Dao F, et al. Plant Commun. 2024 Dec 20:101228. doi: 10.1016/j.xplc.2024.101228. Online ahead of print. Plant Commun. 2024. PMID: 39709521 Free article. No abstract available.

2

iDNA-MS: An Integrated Computational Tool for Detecting DNA Modification Sites in Multiple Genomes.

Lv H, Dao FY, Zhang D, Guan ZX, Yang H, Su W, Liu ML, Ding H, Chen W, Lin H. Lv H, et al. iScience. 2020 Apr 24;23(4):100991. doi: 10.1016/j.isci.2020.100991. Epub 2020 Mar 19. iScience. 2020. PMID: 32240948 Free PMC article.

3

Computational identification of N6-methyladenosine sites in multiple tissues of mammals.

Dao FY, Lv H, Yang YH, Zulfiqar H, Gao H, Lin H. Dao FY, et al. Comput Struct Biotechnol J. 2020 Apr 30;18:1084-1091. doi: 10.1016/j.csbj.2020.04.015. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32435427 Free PMC article.

4

PPD: A Manually Curated Database for Experimentally Verified Prokaryotic Promoters.

Su W, Liu ML, Yang YH, Wang JS, Li SH, Lv H, Dao FY, Yang H, Lin H. Su W, et al. J Mol Biol. 2021 May 28;433(11):166860. doi: 10.1016/j.jmb.2021.166860. Epub 2021 Feb 2. J Mol Biol. 2021. PMID: 33539888

5

iRice-MS: An integrated XGBoost model for detecting multitype post-translational modification sites in rice.

Lv H, Zhang Y, Wang JS, Yuan SS, Sun ZJ, Dao FY, Guan ZX, Lin H, Deng KJ. Lv H, et al. Brief Bioinform. 2022 Jan 17;23(1):bbab486. doi: 10.1093/bib/bbab486. Brief Bioinform. 2022. PMID: 34864888

6

Accurate Identification of DNA Replication Origin by Fusing Epigenomics and Chromatin Interaction Information.

Dao FY, Lv H, Fullwood MJ, Lin H. Dao FY, et al. Research (Wash D C). 2022 Oct 29;2022:9780293. doi: 10.34133/2022/9780293. eCollection 2022. Research (Wash D C). 2022. PMID: 36405252 Free PMC article.

7

DeepKla: An attention mechanism-based deep neural network for protein lysine lactylation site prediction.

Lv H, Dao FY, Lin H. Lv H, et al. Imeta. 2022 Mar 15;1(1):e11. doi: 10.1002/imt2.11. eCollection 2022 Mar. Imeta. 2022. PMID: 38867734 Free PMC article.

8

DeepIPs: comprehensive assessment and computational identification of phosphorylation sites of SARS-CoV-2 infection using a deep learning-based approach.

Lv H, Dao FY, Zulfiqar H, Lin H. Lv H, et al. Brief Bioinform. 2021 Nov 5;22(6):bbab244. doi: 10.1093/bib/bbab244. Brief Bioinform. 2021. PMID: 34184738 Free PMC article.

9

iDNA6mA-Rice: A Computational Tool for Detecting N6-Methyladenine Sites in Rice.

Lv H, Dao FY, Guan ZX, Zhang D, Tan JX, Zhang Y, Chen W, Lin H. Lv H, et al. Front Genet. 2019 Sep 10;10:793. doi: 10.3389/fgene.2019.00793. eCollection 2019. Front Genet. 2019. PMID: 31552096 Free PMC article.

10

AcrPred: A hybrid optimization with enumerated machine learning algorithm to predict Anti-CRISPR proteins.

Dao FY, Liu ML, Su W, Lv H, Zhang ZY, Lin H, Liu L. Dao FY, et al. Int J Biol Macromol. 2023 Feb 15;228:706-714. doi: 10.1016/j.ijbiomac.2022.12.250. Epub 2022 Dec 28. Int J Biol Macromol. 2023. PMID: 36584777

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