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147 results

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Page 1
A foundation model for generalized brain MRI analysis.
Tak D, Garomsa BA, Chaunzwa TL, Zapaishchykova A, Climent Pardo JC, Ye Z, Zielke J, Ravipati Y, Vajapeyam S, Mahootiha M, Smith C, Familiar AM, Liu KX, Prabhu S, Bandopadhayay P, Nabavizadeh A, Mueller S, Aerts HJ, Huang RY, Poussaint TY, Kann BH. Tak D, et al. Among authors: bandopadhayay p. medRxiv [Preprint]. 2024 Dec 3:2024.12.02.24317992. doi: 10.1101/2024.12.02.24317992. medRxiv. 2024. PMID: 39677480 Free PMC article. Preprint.
Longitudinal risk prediction for pediatric glioma with temporal deep learning.
Tak D, Garomsa BA, Zapaishchykova A, Ye Z, Vajapeyam S, Mahootiha M, Climent Pardo JC, Smith C, Familiar AM, Chaunzwa T, Liu KX, Prabhu S, Bandopadhayay P, Nabavizadeh A, Mueller S, Aerts HJ, Haas-Kogan D, Poussaint TY, Kann BH. Tak D, et al. Among authors: bandopadhayay p. medRxiv [Preprint]. 2024 Jun 28:2024.06.04.24308434. doi: 10.1101/2024.06.04.24308434. medRxiv. 2024. PMID: 38978642 Free PMC article. Preprint.
Pediatric neuro-oncology: Highlights of the last quarter-century.
Power P, Straehla JP, Fangusaro J, Bandopadhayay P, Manoharan N. Power P, et al. Among authors: bandopadhayay p. Neoplasia. 2025 Jan;59:101098. doi: 10.1016/j.neo.2024.101098. Epub 2024 Dec 4. Neoplasia. 2025. PMID: 39637686 Free PMC article. Review.
FOXR2 targets LHX6+/DLX+ neural lineages to drive CNS neuroblastoma.
Jessa S, De Cola A, Chandarana B, McNicholas M, Hébert S, Ptack A, Faury D, Tsai JW, Korshunov A, Phoenix TN, Ellezam B, Jones DTW, Taylor MD, Bandopadhayay P, Pathania M, Jabado N, Kleinman CL. Jessa S, et al. Among authors: bandopadhayay p. Cancer Res. 2024 Nov 4. doi: 10.1158/0008-5472.CAN-24-2248. Online ahead of print. Cancer Res. 2024. PMID: 39495206
Multimodal Deep Learning Improves Recurrence Risk Prediction in Pediatric Low-Grade Gliomas.
Mahootiha M, Tak D, Ye Z, Zapaishchykova A, Likitlersuang J, Climent Pardo JC, Boyd A, Vajapeyam S, Chopra R, Prabhu SP, Liu KX, Elhalawani H, Nabavizadeh A, Familiar A, Mueller S, Aerts HJWL, Bandopadhayay P, Ligon KL, Haas-Kogan D, Poussaint TY, Qadir HA, Balasingham I, Kann BH. Mahootiha M, et al. Among authors: bandopadhayay p. Neuro Oncol. 2024 Aug 30:noae173. doi: 10.1093/neuonc/noae173. Online ahead of print. Neuro Oncol. 2024. PMID: 39211987
Author Correction: Molecular profiling of 888 pediatric tumors informs future precision trials and data-sharing initiatives in pediatric cancer.
Forrest SJ, Gupta H, Ward A, Li YY, Doan D, Al-Ibraheemi A, Alexandrescu S, Bandopadhayay P, Shusterman S, Mullen EA, Collins NB, Chi SN, Wright KD, Kumari P, Mazor T, Ligon KL, Shivdasani P, Manam M, MacConaill LE, Ceca E, Benich SN, London WB, Schilsky RL, Bruinooge SS, Guidry Auvil JM, Cerami E, Rollins BJ, Meyerson ML, Lindeman NI, Johnson BE, Cherniack AD, Church AJ, Janeway KA. Forrest SJ, et al. Among authors: bandopadhayay p. Nat Commun. 2024 Aug 22;15(1):7218. doi: 10.1038/s41467-024-51184-1. Nat Commun. 2024. PMID: 39174503 Free PMC article. No abstract available.
Genome-wide CRISPR-Cas9 knockout screens identify DNMT1 as a druggable dependency in sonic hedgehog medulloblastoma.
Tsiami F, Lago C, Pozza N, Piccioni F, Zhao X, Lülsberg F, Root DE, Tiberi L, Kool M, Schittenhelm J, Bandopadhayay P, Segal RA, Tabatabai G, Merk DJ. Tsiami F, et al. Among authors: bandopadhayay p. Acta Neuropathol Commun. 2024 Aug 7;12(1):125. doi: 10.1186/s40478-024-01831-x. Acta Neuropathol Commun. 2024. PMID: 39107797 Free PMC article.
Molecular profiling of 888 pediatric tumors informs future precision trials and data-sharing initiatives in pediatric cancer.
Forrest SJ, Gupta H, Ward A, Li YY, Doan D, Al-Ibraheemi A, Alexandrescu S, Bandopadhayay P, Shusterman S, Mullen EA, Collins NB, Chi SN, Wright KD, Kumari P, Mazor T, Ligon KL, Shivdasani P, Manam M, MacConaill LE, Ceca E, Benich SN, London WB, Schilsky RL, Bruinooge SS, Guidry Auvil JM, Cerami E, Rollins BJ, Meyerson ML, Lindeman NI, Johnson BE, Cherniack AD, Church AJ, Janeway KA. Forrest SJ, et al. Among authors: bandopadhayay p. Nat Commun. 2024 Jul 11;15(1):5837. doi: 10.1038/s41467-024-49944-0. Nat Commun. 2024. PMID: 38992034 Free PMC article.
Resistance, rebound, and recurrence regrowth patterns in pediatric low-grade glioma treated by MAPK inhibition: A modified Delphi approach to build international consensus-based definitions-International Pediatric Low-Grade Glioma Coalition.
O'Hare P, Cooney T, de Blank P, Gutmann DH, Kieran M, Milde T, Fangusaro J, Fisher M, Avula S, Packer R, Fukuoka K, Mankad K, Mueller S, Waanders AJ, Opocher E, Bouffet E, Raabe E, Werle NE, Azizi AA, Robison NJ, Hernáiz Driever P, Russo M, Schouten N, van Tilburg CM, Sehested A, Grill J, Bandopadhayay P, Kilday JP, Witt O, Ashley DM, Ertl-Wagner BB, Tabori U, Hargrave DR. O'Hare P, et al. Among authors: bandopadhayay p. Neuro Oncol. 2024 Aug 5;26(8):1357-1366. doi: 10.1093/neuonc/noae074. Neuro Oncol. 2024. PMID: 38743009 Free PMC article.
Noninvasive Molecular Subtyping of Pediatric Low-Grade Glioma with Self-Supervised Transfer Learning.
Tak D, Ye Z, Zapaischykova A, Zha Y, Boyd A, Vajapeyam S, Chopra R, Hayat H, Prabhu SP, Liu KX, Elhalawani H, Nabavizadeh A, Familiar A, Resnick AC, Mueller S, Aerts HJWL, Bandopadhayay P, Ligon KL, Haas-Kogan DA, Poussaint TY, Kann BH. Tak D, et al. Among authors: bandopadhayay p. Radiol Artif Intell. 2024 May;6(3):e230333. doi: 10.1148/ryai.230333. Radiol Artif Intell. 2024. PMID: 38446044 Free PMC article.
147 results