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DOME Registry: implementing community-wide recommendations for reporting supervised machine learning in biology.
Attafi OA, Clementel D, Kyritsis K, Capriotti E, Farrell G, Fragkouli SC, Castro LJ, Hatos A, Lenaerts T, Mazurenko S, Mozaffari S, Pradelli F, Ruch P, Savojardo C, Turina P, Zambelli F, Piovesan D, Monzon AM, Psomopoulos F, Tosatto SCE. Attafi OA, et al. Among authors: savojardo c. Gigascience. 2024 Jan 2;13:giae094. doi: 10.1093/gigascience/giae094. Gigascience. 2024. PMID: 39661723 Free PMC article.
Computer-based prediction of mitochondria-targeting peptides.
Martelli PL, Savojardo C, Fariselli P, Tasco G, Casadio R. Martelli PL, et al. Among authors: savojardo c. Methods Mol Biol. 2015;1264:305-20. doi: 10.1007/978-1-4939-2257-4_27. Methods Mol Biol. 2015. PMID: 25631024
Critical assessment of variant prioritization methods for rare disease diagnosis within the rare genomes project.
Stenton SL, O'Leary MC, Lemire G, VanNoy GE, DiTroia S, Ganesh VS, Groopman E, O'Heir E, Mangilog B, Osei-Owusu I, Pais LS, Serrano J, Singer-Berk M, Weisburd B, Wilson MW, Austin-Tse C, Abdelhakim M, Althagafi A, Babbi G, Bellazzi R, Bovo S, Carta MG, Casadio R, Coenen PJ, De Paoli F, Floris M, Gajapathy M, Hoehndorf R, Jacobsen JOB, Joseph T, Kamandula A, Katsonis P, Kint C, Lichtarge O, Limongelli I, Lu Y, Magni P, Mamidi TKK, Martelli PL, Mulargia M, Nicora G, Nykamp K, Pejaver V, Peng Y, Pham THC, Podda MS, Rao A, Rizzo E, Saipradeep VG, Savojardo C, Schols P, Shen Y, Sivadasan N, Smedley D, Soru D, Srinivasan R, Sun Y, Sunderam U, Tan W, Tiwari N, Wang X, Wang Y, Williams A, Worthey EA, Yin R, You Y, Zeiberg D, Zucca S, Bakolitsa C, Brenner SE, Fullerton SM, Radivojac P, Rehm HL, O'Donnell-Luria A. Stenton SL, et al. Among authors: savojardo c. Hum Genomics. 2024 Apr 29;18(1):44. doi: 10.1186/s40246-024-00604-w. Hum Genomics. 2024. PMID: 38685113 Free PMC article.
Evaluating the predictions of the protein stability change upon single amino acid substitutions for the FXN CAGI5 challenge.
Savojardo C, Petrosino M, Babbi G, Bovo S, Corbi-Verge C, Casadio R, Fariselli P, Folkman L, Garg A, Karimi M, Katsonis P, Kim PM, Lichtarge O, Martelli PL, Pasquo A, Pal D, Shen Y, Strokach AV, Turina P, Zhou Y, Andreoletti G, Brenner SE, Chiaraluce R, Consalvi V, Capriotti E. Savojardo C, et al. Hum Mutat. 2019 Sep;40(9):1392-1399. doi: 10.1002/humu.23843. Epub 2019 Jul 12. Hum Mutat. 2019. PMID: 31209948 Free PMC article.
Performance of computational methods for the evaluation of pericentriolar material 1 missense variants in CAGI-5.
Monzon AM, Carraro M, Chiricosta L, Reggiani F, Han J, Ozturk K, Wang Y, Miller M, Bromberg Y, Capriotti E, Savojardo C, Babbi G, Martelli PL, Casadio R, Katsonis P, Lichtarge O, Carter H, Kousi M, Katsanis N, Andreoletti G, Moult J, Brenner SE, Ferrari C, Leonardi E, Tosatto SCE. Monzon AM, et al. Among authors: savojardo c. Hum Mutat. 2019 Sep;40(9):1474-1485. doi: 10.1002/humu.23856. Epub 2019 Aug 17. Hum Mutat. 2019. PMID: 31260570 Free PMC article.
79 results