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Higher frequency of interstate over international transmission chains of SARS-CoV-2 virus at the Rio Grande do Sul - Brazil state borders.
Dezordi FZ, Júnior JVJS, Ruoso TF, Batista AG, Fonseca PM, Bernardo LP, Salvato RS, Gregianini TS, Lopes TRR, Flores EF, Weiblen R, Brites PC, Silva MM, da Rocha JBT, Barbosa GL, Machado LC, da Silva AF, Paiva MHS, Bezerra MF, Campos TL, Gräf T, Graichen DAS, Loreto ELDS, Wallau GDL; Fiocruz Genomic Network. Dezordi FZ, et al. Among authors: campos tl. Virus Res. 2024 Dec 17;351:199500. doi: 10.1016/j.virusres.2024.199500. Online ahead of print. Virus Res. 2024. PMID: 39645167 Free article.
Multiple introductions and country-wide spread of DENV-2 genotype II (Cosmopolitan) in Brazil.
Gräf T, Ferreira CDN, de Lima GB, de Lima RE, Machado LC, Campos TL, Schemberger MO, Faoro H, Paiva MHS, Bezerra MF, Nascimento V, Souza V, Nascimento F, Mejía M, Silva D, de Oliveira YS, Gonçalves L, Ramos TCA, de Castro DB, Arcanjo AR, Dantas HAP, Presibella MM, Fernandes SB, Gregianini TS, Paz E Silva KM, Sacchi CT, Cruz ACR, Duarte Dos Santos CN, Bispo de Filippis AM, Bello G, Wallau GL, Salvato RS, Naveca F. Gräf T, et al. Among authors: campos tl. Virus Evol. 2023 Sep 28;9(2):vead059. doi: 10.1093/ve/vead059. eCollection 2023. Virus Evol. 2023. PMID: 38288387 Free PMC article.
Spatiotemporal transmission of SARS-CoV-2 lineages during 2020-2021 in Pernambuco-Brazil.
Machado LC, Dezordi FZ, de Lima GB, de Lima RE, Silva LCA, Pereira LdM, da Silva AF, Silva Neto AMd, Oliveira ALSd, Armstrong AdC, Pessoa-E-Silva R, Loyo RM, Silva BdO, de Almeida AR, da Rocha Pitta MG, Santos FdAdS, Mendonça Siqueira M, Resende PC, Delatorre E, Naveca FG, Miyajima F, Gräf T, do Carmo RF, Pereira MC, Campos TdL, Bezerra MF, Paiva MHS, Wallau GdL; Fiocruz COVID-19 Genomic Network. Machado LC, et al. Microbiol Spectr. 2024 Jun 4;12(6):e0421823. doi: 10.1128/spectrum.04218-23. Epub 2024 Apr 23. Microbiol Spectr. 2024. PMID: 38651879 Free PMC article.
ViralFlow v1.0-a computational workflow for streamlining viral genomic surveillance.
da Silva AF, da Silva Neto AM, Aksenen CF, Jeronimo PMC, Dezordi FZ, Almeida SP, Costa HMP, Salvato RS, Campos TL, Wallau GDL, Of The Fiocruz Genomic Network OB. da Silva AF, et al. Among authors: campos tl. NAR Genom Bioinform. 2024 May 25;6(2):lqae056. doi: 10.1093/nargab/lqae056. eCollection 2024 Jun. NAR Genom Bioinform. 2024. PMID: 38800829 Free PMC article.
HTT-DB: new features and updates.
Dotto BR, Carvalho EL, da Silva AF, Dezordi FZ, Pinto PM, Campos TL, Rezende AM, Wallau GDL. Dotto BR, et al. Among authors: campos tl. Database (Oxford). 2018 Jan 1;2018:bax102. doi: 10.1093/database/bax102. Database (Oxford). 2018. PMID: 29315358 Free PMC article.
Expansion of Oropouche virus in non-endemic Brazilian regions: analysis of genomic characterisation and ecological drivers.
Gräf T, Delatorre E, do Nascimento Ferreira C, Rossi A, Santos HGG, Pizzato BR, Nascimento V, Souza V, de Lima GB, Dezordi FZ, da Silva AF, de Morais CNL, Arantes I, Machado MH, Rovaris DB, Presibella MM, Marques NFQ, Pouzato EG, Stadinicki J, Ribeiro-Rodrigues R, de Jesus Sousa T, Cavalcanti AC, Camargo AC, E Silva KMP, de Oliveira Marques da Costa MM, de Bruycker-Nogueira F, Zanluca C, de Filippis AMB, Dos Santos CND, Wallau GL, Bello G, Naveca FG; OROV Study Group. Gräf T, et al. Lancet Infect Dis. 2024 Nov 15:S1473-3099(24)00687-X. doi: 10.1016/S1473-3099(24)00687-X. Online ahead of print. Lancet Infect Dis. 2024. PMID: 39557055
Genomic and phenotypic characterization of the Oropouche virus strain implicated in the 2022-24 large-scale outbreak in Brazil.
Azevedo EAN, Silva AFD, Silva VGD, Machado LC, de Lima GB, Ishigami BIM, Silva KMPE, Costa MMOMD, Falcão DA, Vasconcelos AP, Silva CCD, Naveca FG, Bezerra MF, Campos TL, Acioli-Santos B, Paiva MHS, de Morais CNL, Wallau GL. Azevedo EAN, et al. Among authors: campos tl. J Med Virol. 2024 Oct;96(10):e70012. doi: 10.1002/jmv.70012. J Med Virol. 2024. PMID: 39415323
44 results