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Surface remodeling and inversion of cell-matrix interactions underlies community recognition and dispersal in Vibrio cholerae biofilms.
Moreau A, Nguyen DT, Hinbest A, Zamora A, Weerasekera R, Matej K, Zhou X, Sanchez S, Brenes IR, Tai JB, Nadell CD, Ng WL, Gordon V, Komarova NL, Olson R, Li Y, Yan J. Moreau A, et al. Among authors: li y. bioRxiv [Preprint]. 2024 Nov 12:2024.11.11.623042. doi: 10.1101/2024.11.11.623042. bioRxiv. 2024. Update in: Nat Commun. 2025 Jan 2;16(1):327. doi: 10.1038/s41467-024-55602-2 PMID: 39605525 Free PMC article. Updated. Preprint.
A single-cell atlas characterizes dysregulation of the bone marrow immune microenvironment associated with outcomes in multiple myeloma.
Pilcher WC, Yao L, Gonzalez-Kozlova E, Pita-Juarez Y, Karagkouni D, Acharya CR, Michaud ME, Hamilton M, Nanda S, Song Y, Sato K, Wang JT, Satpathy S, Ma Y, Schulman J, D'Souza D, Jayasinghe RG, Cheloni G, Bakhtiari M, Pabustan N, Nie K, Foltz JA, Saldarriaga I, Alaaeldin R, Lepisto E, Chen R, Fiala MA, Thomas BE, Cook A, Dos Santos JV, Chiang IL, Figueiredo I, Fortier J, Slade M, Oh ST, Rettig MP, Anderson E, Li Y, Dasari S, Strausbauch MA, Simon VA; Immune Atlas Consortium; Rahman AH, Chen Z, Lagana A, DiPersio JF, Rosenblatt J, Kim-Schulze S, Dhodapkar MV, Lonial S, Kumar S, Bhasin SS, Kourelis T, Vij R, Avigan D, Cho HJ, Mulligan G, Ding L, Gnjatic S, Vlachos IS, Bhasin M. Pilcher WC, et al. Among authors: li y. bioRxiv [Preprint]. 2024 May 17:2024.05.15.593193. doi: 10.1101/2024.05.15.593193. bioRxiv. 2024. PMID: 38798338 Free PMC article. Preprint.
A general platform for targeting MHC-II antigens via a single loop.
Du H, Liu J, Jude KM, Yang X, Li Y, Bell B, Yang H, Kassardjian A, Mobedi A, Parekh U, Sperberg RAP, Julien JP, Mellins ED, Garcia KC, Huang PS. Du H, et al. Among authors: li y. bioRxiv [Preprint]. 2024 Jan 30:2024.01.26.577489. doi: 10.1101/2024.01.26.577489. bioRxiv. 2024. PMID: 38352315 Free PMC article. Preprint.
Dnajc3 (HSP40) Enhances Axon Regeneration in the Mouse Optic Nerve.
Wang J, Li Y, Struebing FL, Jardines S, Lin ST, Lin F, Geisert EE. Wang J, et al. Among authors: li y. bioRxiv [Preprint]. 2024 Nov 4:2024.10.08.617251. doi: 10.1101/2024.10.08.617251. bioRxiv. 2024. PMID: 39416210 Free PMC article. Preprint.
Single-cell Mayo Map ( scMayoMap ): an easy-to-use tool for cell type annotation in single-cell RNA-sequencing data analysis.
Yang L, Ng YE, Sun H, Li Y, Chini LCS, LeBrasseur NK, Chen J, Zhang X. Yang L, et al. Among authors: li y. bioRxiv [Preprint]. 2023 May 4:2023.05.03.538463. doi: 10.1101/2023.05.03.538463. bioRxiv. 2023. Update in: BMC Biol. 2023 Oct 20;21(1):223. doi: 10.1186/s12915-023-01728-6 PMID: 37205463 Free PMC article. Updated. Preprint.
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