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SARS-CoV-2 Illumina GeNome Assembly Line (SIGNAL), a Snakemate workflow for rapid and bulk analysis of Illumina sequencing of SARS-CoV-2 genomes.
Nasir JA, Maguire F, Smith KM, Panousis EM, Baker SJC, Aftanas P, Raphenya AR, Alcock BP, Maan H, Knox NC, Banerjee A, Mossman K, Wang B, Simpson JT, Kozak RA, Mubareka S, McArthur AG. Nasir JA, et al. Among authors: mubareka s. NAR Genom Bioinform. 2024 Dec 18;6(4):lqae176. doi: 10.1093/nargab/lqae176. eCollection 2024 Dec. NAR Genom Bioinform. 2024. PMID: 39703420 Free PMC article.
QBox: An Automated Portable System for Multiplex Quantum Dot Barcode Diagnostics.
Osborne M, Chen H, Kadhiresan P, Mahbub N, Malekjahani A, Kozlowski HN, Udugama B, Nguyen LNM, Perusini S, Mubareka S, Chan WCW. Osborne M, et al. Among authors: mubareka s. ACS Nano. 2024 Dec 10;18(49):33629-33642. doi: 10.1021/acsnano.4c12306. Epub 2024 Nov 25. ACS Nano. 2024. PMID: 39585955
The Canadian VirusSeq Data Portal and Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology.
Gill EE, Jia B, Murall CL, Poujol R, Anwar MZ, John NS, Richardsson J, Hobb A, Olabode AS, Lepsa A, Duggan AT, Tyler AD, N'Guessan A, Kachru A, Chan B, Yoshida C, Yung CK, Bujold D, Andric D, Su E, Griffiths EJ, Van Domselaar G, Jolly GW, Ward HKE, Feher H, Baker J, Simpson JT, Uddin J, Ragoussis J, Eubank J, Fritz JH, Gálvez JH, Fang K, Cullion K, Rivera L, Xiang L, Croxen MA, Shiell M, Prystajecky N, Quirion PO, Bajari R, Rich S, Mubareka S, Moreira S, Cain S, Sutcliffe SG, Kraemer SA, Alturmessov Y, Joly Y, Cphln Consortium, CanCOGeN Consortium, VirusSeq Data Portal Academic And Health Network, Fiume M, Snutch TP, Bell C, Lopez-Correa C, Hussin JG, Joy JB, Colijn C, Gordon PMK, Hsiao WWL, Poon AFY, Knox NC, Courtot M, Stein L, Otto SP, Bourque G, Shapiro BJ, Brinkman FSL. Gill EE, et al. Among authors: mubareka s. Microb Genom. 2024 Oct;10(10):001293. doi: 10.1099/mgen.0.001293. Microb Genom. 2024. PMID: 39401061 Free PMC article.
Canadian health care providers' and education workers' hesitance to receive original and bivalent COVID-19 vaccines.
Coleman BL, Gutmanis I, Bondy SJ, Harrison R, Langley J, Fischer K, Cooper C, Valiquette L, Muller MP, Powis J, Bowdish D, Katz K, Loeb M, Smieja M, McNeil SA, Mubareka S, Nadarajah J, Arnoldo S, McGeer A. Coleman BL, et al. Among authors: mubareka s. Vaccine. 2024 Oct 24;42(24):126271. doi: 10.1016/j.vaccine.2024.126271. Epub 2024 Sep 2. Vaccine. 2024. PMID: 39226785 Free article.
The Wildlife Emerging Pathogens Initiative: Wild EPI and One Health.
Lee Y, Jeeves S, Crawshaw L, Kotwa J, Pickering B, Mubareka S, Jardine C, Bowman J. Lee Y, et al. Among authors: mubareka s. iScience. 2024 Jul 13;27(7):110317. doi: 10.1016/j.isci.2024.110317. eCollection 2024 Jul 19. iScience. 2024. PMID: 39104572 Free PMC article.
Effectiveness of Influenza Vaccination During Pregnancy Against Laboratory-Confirmed Seasonal Influenza Among Infants Under 6 Months of Age in Ontario, Canada.
Fell DB, Russell M, Fung SG, Swayze S, Chung H, Buchan SA, Roda W, Smolarchuk C, Wilson K, Crowcroft NS, Schwartz KL, Gubbay JB, McGeer AJ, Smieja M, Richardson DC, Katz K, Zahariadis G, Campigotto A, Mubareka S, McNally JD, Karnauchow T, Zelyas N, Svenson LW, Kwong JC. Fell DB, et al. Among authors: mubareka s. J Infect Dis. 2024 Jul 25;230(1):e80-e92. doi: 10.1093/infdis/jiad539. J Infect Dis. 2024. PMID: 39052720 Free PMC article.
175 results