Le VT - Search Results

1

MCNN-AAPT: accurate classification and functional prediction of amino acid and peptide transporters in secondary active transporters using protein language models and multi-window deep learning.

Malik MS, Le VT, Shah SMA, Ou YY. Malik MS, et al. Among authors: le vt. J Biomol Struct Dyn. 2024 Nov 22:1-10. doi: 10.1080/07391102.2024.2431664. Online ahead of print. J Biomol Struct Dyn. 2024. PMID: 39576667

2

DeepPLM_mCNN: An approach for enhancing ion channel and ion transporter recognition by multi-window CNN based on features from pre-trained language models.

Le VT, Malik MS, Tseng YH, Lee YC, Huang CI, Ou YY. Le VT, et al. Comput Biol Chem. 2024 Jun;110:108055. doi: 10.1016/j.compbiolchem.2024.108055. Epub 2024 Mar 20. Comput Biol Chem. 2024. PMID: 38555810

3

ProtTrans and multi-window scanning convolutional neural networks for the prediction of protein-peptide interaction sites.

Le VT, Zhan ZJ, Vu TT, Malik MS, Ou YY. Le VT, et al. J Mol Graph Model. 2024 Jul;130:108777. doi: 10.1016/j.jmgm.2024.108777. Epub 2024 Apr 17. J Mol Graph Model. 2024. PMID: 38642500

4

MCNN_MC: Computational Prediction of Mitochondrial Carriers and Investigation of Bongkrekic Acid Toxicity Using Protein Language Models and Convolutional Neural Networks.

Malik MS, Chang YY, Liu YC, Le VT, Ou YY. Malik MS, et al. Among authors: le vt. J Chem Inf Model. 2024 Dec 23;64(24):9125-9134. doi: 10.1021/acs.jcim.4c00961. Epub 2024 Aug 12. J Chem Inf Model. 2024. PMID: 39133248 Free PMC article.

5

VesiMCNN: Using pre-trained protein language models and multiple window scanning convolutional neural networks to identify vesicular transport proteins.

Le VT, Tseng YH, Liu YC, Malik MS, Ou YY. Le VT, et al. Int J Biol Macromol. 2024 Sep 26;280(Pt 3):136048. doi: 10.1016/j.ijbiomac.2024.136048. Online ahead of print. Int J Biol Macromol. 2024. PMID: 39332561

6

ATP_mCNN: Predicting ATP binding sites through pretrained language models and multi-window neural networks.

Le VT, Malik MS, Lin YJ, Liu YC, Chang YY, Ou YY. Le VT, et al. Comput Biol Med. 2024 Dec 8;185:109541. doi: 10.1016/j.compbiomed.2024.109541. Online ahead of print. Comput Biol Med. 2024. PMID: 39653625

7

Optimizing adsorption and photocatalysis for tetracycline and sulfamethoxazole removal: the role of Ag⁺ and NH₄ ⁺ in Bi-MOF derivatives.

Anh Tran V, Tran TTV, Sang TT, Thu NA, Dat ND, Vu Quang H, Le VT, Thi Vo TT. Anh Tran V, et al. Among authors: le vt. RSC Adv. 2025 Jan 23;15(3):2205-2216. doi: 10.1039/d4ra07287a. eCollection 2025 Jan 16. RSC Adv. 2025. PMID: 39850085 Free PMC article.

8

Photocatalytic degradation performance of a chitosan/ZnO-Fe₃O₄ nanocomposite over cationic and anionic dyes under visible-light irradiation.

Quy BM, Thu NTN, Xuan VT, Hoa NTH, Linh NTN, Tung VQ, Le VTT, Thao TT, Ngan NTK, Tho PT, Hung NM, Ha LT. Quy BM, et al. Among authors: le vtt. RSC Adv. 2025 Jan 17;15(3):1590-1603. doi: 10.1039/d4ra08262a. eCollection 2025 Jan 16. RSC Adv. 2025. PMID: 39831049 Free PMC article.

9

Structural, functional, and regulatory evaluation of a cysteine post-translationally modified Gcn5-related N-acetyltransferase.

Uychoco P, Majorek KA, Ives AN, Le VTB, Caro De Silva PL, Paurus VL, Attah IK, Lipton MS, Minor W, Kuhn ML. Uychoco P, et al. Among authors: le vtb. Biochem Biophys Res Commun. 2025 Jan 11;748:151299. doi: 10.1016/j.bbrc.2025.151299. Online ahead of print. Biochem Biophys Res Commun. 2025. PMID: 39826527 Free article.

10

N-terminal domain swapping: A new paradigm for spermidine/spermine N-acetyltransferase (SSAT) protein structures?

Mayer-Harnisch CE, Figueroa Paniagua D, Maltseva N, Kim Y, Le VTB, Joachimiak A, Kuhn ML. Mayer-Harnisch CE, et al. Among authors: le vtb. Biochem Biophys Res Commun. 2025 Jan 10;748:151302. doi: 10.1016/j.bbrc.2025.151302. Online ahead of print. Biochem Biophys Res Commun. 2025. PMID: 39823891 Free article.

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