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Missing microbial eukaryotes and misleading meta-omic conclusions.
Krinos AI, Mars Brisbin M, Hu SK, Cohen NR, Rynearson TA, Follows MJ, Schulz F, Alexander H. Krinos AI, et al. Among authors: schulz f. Nat Commun. 2024 Nov 14;15(1):9873. doi: 10.1038/s41467-024-52212-w. Nat Commun. 2024. PMID: 39543100 Free PMC article.
The trajectory of microbial single-cell sequencing.
Woyke T, Doud DFR, Schulz F. Woyke T, et al. Among authors: schulz f. Nat Methods. 2017 Oct 31;14(11):1045-1054. doi: 10.1038/nmeth.4469. Nat Methods. 2017. PMID: 29088131 Review.
Hidden diversity of soil giant viruses.
Schulz F, Alteio L, Goudeau D, Ryan EM, Yu FB, Malmstrom RR, Blanchard J, Woyke T. Schulz F, et al. Nat Commun. 2018 Nov 19;9(1):4881. doi: 10.1038/s41467-018-07335-2. Nat Commun. 2018. PMID: 30451857 Free PMC article.
Giant virus diversity and host interactions through global metagenomics.
Schulz F, Roux S, Paez-Espino D, Jungbluth S, Walsh DA, Denef VJ, McMahon KD, Konstantinidis KT, Eloe-Fadrosh EA, Kyrpides NC, Woyke T. Schulz F, et al. Nature. 2020 Feb;578(7795):432-436. doi: 10.1038/s41586-020-1957-x. Epub 2020 Jan 22. Nature. 2020. PMID: 31968354 Free PMC article.
A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Among authors: schulz f. Nat Biotechnol. 2021 Apr;39(4):499-509. doi: 10.1038/s41587-020-0718-6. Epub 2020 Nov 9. Nat Biotechnol. 2021. PMID: 33169036 Free PMC article.
Lytic archaeal viruses infect abundant primary producers in Earth's crust.
Rahlff J, Turzynski V, Esser SP, Monsees I, Bornemann TLV, Figueroa-Gonzalez PA, Schulz F, Woyke T, Klingl A, Moraru C, Probst AJ. Rahlff J, et al. Among authors: schulz f. Nat Commun. 2021 Jul 30;12(1):4642. doi: 10.1038/s41467-021-24803-4. Nat Commun. 2021. PMID: 34330907 Free PMC article.
IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
Camargo AP, Nayfach S, Chen IA, Palaniappan K, Ratner A, Chu K, Ritter SJ, Reddy TBK, Mukherjee S, Schulz F, Call L, Neches RY, Woyke T, Ivanova NN, Eloe-Fadrosh EA, Kyrpides NC, Roux S. Camargo AP, et al. Among authors: schulz f. Nucleic Acids Res. 2023 Jan 6;51(D1):D733-D743. doi: 10.1093/nar/gkac1037. Nucleic Acids Res. 2023. PMID: 36399502 Free PMC article.
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.
Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, Malmstrom RR, Birren B, Podar M, Bork P, Weinstock GM, Garrity GM, Dodsworth JA, Yooseph S, Sutton G, Glöckner FO, Gilbert JA, Nelson WC, Hallam SJ, Jungbluth SP, Ettema TJG, Tighe S, Konstantinidis KT, Liu WT, Baker BJ, Rattei T, Eisen JA, Hedlund B, McMahon KD, Fierer N, Knight R, Finn R, Cochrane G, Karsch-Mizrachi I, Tyson GW, Rinke C; Genome Standards Consortium; Lapidus A, Meyer F, Yilmaz P, Parks DH, Eren AM, Schriml L, Banfield JF, Hugenholtz P, Woyke T. Bowers RM, et al. Among authors: schulz f. Nat Biotechnol. 2017 Aug 8;35(8):725-731. doi: 10.1038/nbt.3893. Nat Biotechnol. 2017. PMID: 28787424 Free PMC article.
600 results