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Page 1
Structural variation in the pangenome of wild and domesticated barley.
Jayakodi M, Lu Q, Pidon H, Rabanus-Wallace MT, Bayer M, Lux T, Guo Y, Jaegle B, Badea A, Bekele W, Brar GS, Braune K, Bunk B, Chalmers KJ, Chapman B, Jørgensen ME, Feng JW, Feser M, Fiebig A, Gundlach H, Guo W, Haberer G, Hansson M, Himmelbach A, Hoffie I, Hoffie RE, Hu H, Isobe S, König P, Kale SM, Kamal N, Keeble-Gagnère G, Keller B, Knauft M, Koppolu R, Krattinger SG, Kumlehn J, Langridge P, Li C, Marone MP, Maurer A, Mayer KFX, Melzer M, Muehlbauer GJ, Murozuka E, Padmarasu S, Perovic D, Pillen K, Pin PA, Pozniak CJ, Ramsay L, Pedas PR, Rutten T, Sakuma S, Sato K, Schüler D, Schmutzer T, Scholz U, Schreiber M, Shirasawa K, Simpson C, Skadhauge B, Spannagl M, Steffenson BJ, Thomsen HC, Tibbits JF, Nielsen MTS, Trautewig C, Vequaud D, Voss C, Wang P, Waugh R, Westcott S, Rasmussen MW, Zhang R, Zhang XQ, Wicker T, Dockter C, Mascher M, Stein N. Jayakodi M, et al. Among authors: muehlbauer gj. Nature. 2024 Dec;636(8043):654-662. doi: 10.1038/s41586-024-08187-1. Epub 2024 Nov 13. Nature. 2024. PMID: 39537924 Free PMC article.
A chromosome conformation capture ordered sequence of the barley genome.
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang XQ, Zhang Q, Barrero RA, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan A, Sampath D, Heavens D, Clissold L, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke JK, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer GJ, Clark MD, Caccamo M, Schulman AH, Mayer KFX, Platzer M, Close TJ, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N. Mascher M, et al. Among authors: muehlbauer gj. Nature. 2017 Apr 26;544(7651):427-433. doi: 10.1038/nature22043. Nature. 2017. PMID: 28447635 Free article.
Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley.
Mascher M, Schuenemann VJ, Davidovich U, Marom N, Himmelbach A, Hübner S, Korol A, David M, Reiter E, Riehl S, Schreiber M, Vohr SH, Green RE, Dawson IK, Russell J, Kilian B, Muehlbauer GJ, Waugh R, Fahima T, Krause J, Weiss E, Stein N. Mascher M, et al. Among authors: muehlbauer gj. Nat Genet. 2016 Sep;48(9):1089-93. doi: 10.1038/ng.3611. Epub 2016 Jul 18. Nat Genet. 2016. PMID: 27428749
Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation.
Russell J, Mascher M, Dawson IK, Kyriakidis S, Calixto C, Freund F, Bayer M, Milne I, Marshall-Griffiths T, Heinen S, Hofstad A, Sharma R, Himmelbach A, Knauft M, van Zonneveld M, Brown JW, Schmid K, Kilian B, Muehlbauer GJ, Stein N, Waugh R. Russell J, et al. Among authors: muehlbauer gj. Nat Genet. 2016 Sep;48(9):1024-30. doi: 10.1038/ng.3612. Epub 2016 Jul 18. Nat Genet. 2016. PMID: 27428750
Multiple wheat genomes reveal global variation in modern breeding.
Walkowiak S, Gao L, Monat C, Haberer G, Kassa MT, Brinton J, Ramirez-Gonzalez RH, Kolodziej MC, Delorean E, Thambugala D, Klymiuk V, Byrns B, Gundlach H, Bandi V, Siri JN, Nilsen K, Aquino C, Himmelbach A, Copetti D, Ban T, Venturini L, Bevan M, Clavijo B, Koo DH, Ens J, Wiebe K, N'Diaye A, Fritz AK, Gutwin C, Fiebig A, Fosker C, Fu BX, Accinelli GG, Gardner KA, Fradgley N, Gutierrez-Gonzalez J, Halstead-Nussloch G, Hatakeyama M, Koh CS, Deek J, Costamagna AC, Fobert P, Heavens D, Kanamori H, Kawaura K, Kobayashi F, Krasileva K, Kuo T, McKenzie N, Murata K, Nabeka Y, Paape T, Padmarasu S, Percival-Alwyn L, Kagale S, Scholz U, Sese J, Juliana P, Singh R, Shimizu-Inatsugi R, Swarbreck D, Cockram J, Budak H, Tameshige T, Tanaka T, Tsuji H, Wright J, Wu J, Steuernagel B, Small I, Cloutier S, Keeble-Gagnère G, Muehlbauer G, Tibbets J, Nasuda S, Melonek J, Hucl PJ, Sharpe AG, Clark M, Legg E, Bharti A, Langridge P, Hall A, Uauy C, Mascher M, Krattinger SG, Handa H, Shimizu KK, Distelfeld A, Chalmers K, Keller B, Mayer KFX, Poland J, Stein N, McCartney CA, Spannagl M, Wicker T, Pozniak CJ. Walkowiak S, et al. Nature. 2020 Dec;588(7837):277-283. doi: 10.1038/s41586-020-2961-x. Epub 2020 Nov 25. Nature. 2020. PMID: 33239791 Free PMC article.
INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1.
Ramsay L, Comadran J, Druka A, Marshall DF, Thomas WT, Macaulay M, MacKenzie K, Simpson C, Fuller J, Bonar N, Hayes PM, Lundqvist U, Franckowiak JD, Close TJ, Muehlbauer GJ, Waugh R. Ramsay L, et al. Among authors: muehlbauer gj. Nat Genet. 2011 Feb;43(2):169-72. doi: 10.1038/ng.745. Epub 2011 Jan 9. Nat Genet. 2011. PMID: 21217754
TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools.
Monat C, Padmarasu S, Lux T, Wicker T, Gundlach H, Himmelbach A, Ens J, Li C, Muehlbauer GJ, Schulman AH, Waugh R, Braumann I, Pozniak C, Scholz U, Mayer KFX, Spannagl M, Stein N, Mascher M. Monat C, et al. Among authors: muehlbauer gj. Genome Biol. 2019 Dec 18;20(1):284. doi: 10.1186/s13059-019-1899-5. Genome Biol. 2019. PMID: 31849336 Free PMC article.
136 results