Alkan C - Search Results

1

TargetCall: eliminating the wasted computation in basecalling via pre-basecalling filtering.

Cavlak MB, Singh G, Alser M, Firtina C, Lindegger J, Sadrosadati M, Mansouri Ghiasi N, Alkan C, Mutlu O. Cavlak MB, et al. Among authors: alkan c. Front Genet. 2024 Oct 28;15:1429306. doi: 10.3389/fgene.2024.1429306. eCollection 2024. Front Genet. 2024. PMID: 39529848 Free PMC article.

2

AirLift: A Fast and Comprehensive Technique for Remapping Alignments between Reference Genomes.

Kim JS, Firtina C, Cavlak MB, Cali DS, Hajinazar N, Alser M, Alkan C, Mutlu O. Kim JS, et al. Among authors: alkan c. IEEE/ACM Trans Comput Biol Bioinform. 2024 Aug 19;PP. doi: 10.1109/TCBB.2024.3433378. Online ahead of print. IEEE/ACM Trans Comput Biol Bioinform. 2024. PMID: 39159015

3

Pre-processing of paleogenomes: mitigating reference bias and postmortem damage in ancient genome data.

Koptekin D, Yapar E, Vural KB, Sağlıcan E, Altınışık NE, Malaspinas AS, Alkan C, Somel M. Koptekin D, et al. Among authors: alkan c. Genome Biol. 2025 Jan 9;26(1):6. doi: 10.1186/s13059-024-03462-w. Genome Biol. 2025. PMID: 39789608 Free PMC article.

4

Data- and Physics-driven Deep Learning Based Reconstruction for Fast MRI: Fundamentals and Methodologies.

Huang J, Wu Y, Wang F, Fang Y, Nan Y, Alkan C, Abraham D, Liao C, Xu L, Gao Z, Wu W, Zhu L, Chen Z, Lally P, Bangerter N, Setsompop K, Guo Y, Rueckert D, Wang G, Yang G. Huang J, et al. Among authors: alkan c. IEEE Rev Biomed Eng. 2024 Oct 22;PP. doi: 10.1109/RBME.2024.3485022. Online ahead of print. IEEE Rev Biomed Eng. 2024. PMID: 39437302

5

Assessment of the validity and reliability of edinburgh postpartum depression scale in Turkish men.

Alkan Ç, Didikoğlu A, Çöme O, Yılmaz B, Mevsim V. Alkan Ç, et al. J Perinat Med. 2024 Oct 10;52(9):1020-1029. doi: 10.1515/jpm-2024-0026. Print 2024 Nov 26. J Perinat Med. 2024. PMID: 39378295

6

Author Correction: AI is a viable alternative to high throughput screening: a 318-target study.

Atomwise AIMS Program. Atomwise AIMS Program. Sci Rep. 2024 Sep 16;14(1):21579. doi: 10.1038/s41598-024-70321-w. Sci Rep. 2024. PMID: 39284864 Free PMC article. No abstract available.

7

Spherical echo-planar time-resolved imaging (sEPTI) for rapid 3D quantitative

T_{2}^{*}

and susceptibility imaging.

Wang N, Liao C, Cao X, Nishimura M, Brackenier YWE, Yurt M, Gao M, Abraham D, Alkan C, Iyer SS, Zhou Z, Jeong H, Kerr A, Haldar JP, Setsompop K. Wang N, et al. Among authors: alkan c. Magn Reson Med. 2025 Jan;93(1):121-137. doi: 10.1002/mrm.30255. Epub 2024 Sep 9. Magn Reson Med. 2025. PMID: 39250435

8

AutoSamp: Autoencoding k-space Sampling via Variational Information Maximization for 3D MRI.

Alkan C, Mardani M, Liao C, Li Z, Vasanawala SS, Pauly JM. Alkan C, et al. IEEE Trans Med Imaging. 2024 Aug 15;PP. doi: 10.1109/TMI.2024.3443292. Online ahead of print. IEEE Trans Med Imaging. 2024. PMID: 39146168

9

Distinct Pathological Changes in Preweaning Mice Infected with Live-Attenuated Rift Valley Fever Virus Strains.

Alkan C, Jurado-Cobena E, Ikegami T. Alkan C, et al. Viruses. 2024 Jun 21;16(7):999. doi: 10.3390/v16070999. Viruses. 2024. PMID: 39066162 Free PMC article.

10

Use of Human Macrophages to Study Bunyavirus NSs Functions.

Alkan C, Ikegami T. Alkan C, et al. Methods Mol Biol. 2024;2824:397-408. doi: 10.1007/978-1-0716-3926-9_25. Methods Mol Biol. 2024. PMID: 39039426

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