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Peptipedia v2.0: a peptide sequence database and user-friendly web platform. A major update.
Cabas-Mora G, Daza A, Soto-García N, Garrido V, Alvarez D, Navarrete M, Sarmiento-Varón L, Sepúlveda Yañez JH, Davari MD, Cadet F, Olivera-Nappa Á, Uribe-Paredes R, Medina-Ortiz D. Cabas-Mora G, et al. Among authors: davari md. Database (Oxford). 2024 Nov 8;2024:baae113. doi: 10.1093/database/baae113. Database (Oxford). 2024. PMID: 39514414 Free PMC article.
Peptide-based drug discovery through artificial intelligence: towards an autonomous design of therapeutic peptides.
Goles M, Daza A, Cabas-Mora G, Sarmiento-Varón L, Sepúlveda-Yañez J, Anvari-Kazemabad H, Davari MD, Uribe-Paredes R, Olivera-Nappa Á, Navarrete MA, Medina-Ortiz D. Goles M, et al. Among authors: davari md. Brief Bioinform. 2024 May 23;25(4):bbae275. doi: 10.1093/bib/bbae275. Brief Bioinform. 2024. PMID: 38856172 Free PMC article. Review.
PyPEF-An Integrated Framework for Data-Driven Protein Engineering.
Siedhoff NE, Illig AM, Schwaneberg U, Davari MD. Siedhoff NE, et al. Among authors: davari md. J Chem Inf Model. 2021 Jul 26;61(7):3463-3476. doi: 10.1021/acs.jcim.1c00099. Epub 2021 Jul 14. J Chem Inf Model. 2021. PMID: 34260225
Machine learning-assisted enzyme engineering.
Siedhoff NE, Schwaneberg U, Davari MD. Siedhoff NE, et al. Among authors: davari md. Methods Enzymol. 2020;643:281-315. doi: 10.1016/bs.mie.2020.05.005. Epub 2020 Jun 12. Methods Enzymol. 2020. PMID: 32896285 Review.
87 results