Hu M - Search Results

1

Droplet Hi-C enables scalable, single-cell profiling of chromatin architecture in heterogeneous tissues.

Chang L, Xie Y, Taylor B, Wang Z, Sun J, Armand EJ, Mishra S, Xu J, Tastemel M, Lie A, Gibbs ZA, Indralingam HS, Tan TM, Bejar R, Chen CC, Furnari FB, Hu M, Ren B. Chang L, et al. Among authors: hu m. Nat Biotechnol. 2024 Oct 18. doi: 10.1038/s41587-024-02447-1. Online ahead of print. Nat Biotechnol. 2024. PMID: 39424717

2

Topological domains in mammalian genomes identified by analysis of chromatin interactions.

Dixon JR, Selvaraj S, Yue F, Kim A, Li Y, Shen Y, Hu M, Liu JS, Ren B. Dixon JR, et al. Among authors: hu m. Nature. 2012 Apr 11;485(7398):376-80. doi: 10.1038/nature11082. Nature. 2012. PMID: 22495300 Free PMC article.

3

Genome-wide mapping and analysis of chromosome architecture.

Schmitt AD, Hu M, Ren B. Schmitt AD, et al. Among authors: hu m. Nat Rev Mol Cell Biol. 2016 Dec;17(12):743-755. doi: 10.1038/nrm.2016.104. Epub 2016 Sep 1. Nat Rev Mol Cell Biol. 2016. PMID: 27580841 Free PMC article. Review.

4

A Compendium of Chromatin Contact Maps Reveals Spatially Active Regions in the Human Genome.

Schmitt AD, Hu M, Jung I, Xu Z, Qiu Y, Tan CL, Li Y, Lin S, Lin Y, Barr CL, Ren B. Schmitt AD, et al. Among authors: hu m. Cell Rep. 2016 Nov 15;17(8):2042-2059. doi: 10.1016/j.celrep.2016.10.061. Cell Rep. 2016. PMID: 27851967 Free PMC article.

5

HUGIn: Hi-C Unifying Genomic Interrogator.

Martin JS, Xu Z, Reiner AP, Mohlke KL, Sullivan P, Ren B, Hu M, Li Y. Martin JS, et al. Among authors: hu m. Bioinformatics. 2017 Dec 1;33(23):3793-3795. doi: 10.1093/bioinformatics/btx359. Bioinformatics. 2017. PMID: 28582503 Free PMC article.

6

Histone H3 lysine 4 monomethylation modulates long-range chromatin interactions at enhancers.

Yan J, Chen SA, Local A, Liu T, Qiu Y, Dorighi KM, Preissl S, Rivera CM, Wang C, Ye Z, Ge K, Hu M, Wysocka J, Ren B. Yan J, et al. Among authors: hu m. Cell Res. 2018 Feb;28(2):204-220. doi: 10.1038/cr.2018.1. Epub 2018 Jan 9. Cell Res. 2018. PMID: 29313530 Free PMC article.

7

Enhancing Hi-C data resolution with deep convolutional neural network HiCPlus.

Zhang Y, An L, Xu J, Zhang B, Zheng WJ, Hu M, Tang J, Yue F. Zhang Y, et al. Among authors: hu m. Nat Commun. 2018 Feb 21;9(1):750. doi: 10.1038/s41467-018-03113-2. Nat Commun. 2018. PMID: 29467363 Free PMC article.

8

Histone H3 lysine 4 monomethylation modulates long-range chromatin interactions at enhancers.

Yan J, Chen SA, Local A, Liu T, Qiu Y, Dorighi KM, Preissl S, Rivera CM, Wang C, Ye Z, Ge K, Hu M, Wysocka J, Ren B. Yan J, et al. Among authors: hu m. Cell Res. 2018 Mar;28(3):387. doi: 10.1038/cr.2018.18. Cell Res. 2018. PMID: 29497152 Free PMC article.

9

MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments.

Juric I, Yu M, Abnousi A, Raviram R, Fang R, Zhao Y, Zhang Y, Qiu Y, Yang Y, Li Y, Ren B, Hu M. Juric I, et al. Among authors: hu m. PLoS Comput Biol. 2019 Apr 15;15(4):e1006982. doi: 10.1371/journal.pcbi.1006982. eCollection 2019 Apr. PLoS Comput Biol. 2019. PMID: 30986246 Free PMC article.

10

An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome.

Zhu C, Yu M, Huang H, Juric I, Abnousi A, Hu R, Lucero J, Behrens MM, Hu M, Ren B. Zhu C, et al. Among authors: hu m, hu r. Nat Struct Mol Biol. 2019 Nov;26(11):1063-1070. doi: 10.1038/s41594-019-0323-x. Epub 2019 Nov 6. Nat Struct Mol Biol. 2019. PMID: 31695190 Free PMC article.

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