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MHConstructor: A high-throughput, haplotype-informed solution to the MHC assembly challenge.
Wade KJ, Suseno R, Kizer K, Williams J, Boquett J, Caillier S, Pollock NR, Renschen A, Santaniello A, Oksenberg JR, Norman PJ, Augusto DG, Hollenbach JA. Wade KJ, et al. Among authors: caillier s. bioRxiv [Preprint]. 2024 May 21:2024.05.20.595060. doi: 10.1101/2024.05.20.595060. bioRxiv. 2024. Update in: Genome Biol. 2024 Oct 17;25(1):274. doi: 10.1186/s13059-024-03412-6 PMID: 38826378 Free PMC article. Updated. Preprint.
Inflammatory and neurodegenerative serum protein biomarkers increase sensitivity to detect clinical and radiographic disease activity in multiple sclerosis.
Chitnis T, Qureshi F, Gehman VM, Becich M, Bove R, Cree BAC, Gomez R, Hauser SL, Henry RG, Katrib A, Lokhande H, Paul A, Caillier SJ, Santaniello A, Sattarnezhad N, Saxena S, Weiner H, Yano H, Baranzini SE. Chitnis T, et al. Among authors: caillier sj. Nat Commun. 2024 May 20;15(1):4297. doi: 10.1038/s41467-024-48602-9. Nat Commun. 2024. PMID: 38769309 Free PMC article.
Neurofilament Light Chain Elevation and Disability Progression in Multiple Sclerosis.
Abdelhak A, Benkert P, Schaedelin S, Boscardin WJ, Cordano C, Oechtering J, Ananth K, Granziera C, Melie-Garcia L, Montes SC, Beaudry-Richard A, Achtnichts L, Oertel FC, Lalive PH, Leppert D, Müller S, Henry RG, Pot C, Matthias A, Salmen A, Oksenberg JR, Disanto G, Zecca C, D'Souza M, Du Pasquier R, Bridel C, Gobbi C, Kappos L, Hauser SL, Cree BAC, Kuhle J, Green AJ; UCSF, MS EPIC, and the SMSC Study Teams. Abdelhak A, et al. JAMA Neurol. 2023 Dec 1;80(12):1317-1325. doi: 10.1001/jamaneurol.2023.3997. JAMA Neurol. 2023. PMID: 37930670 Free PMC article.
Inflammatory and neurodegenerative serum protein biomarkers increase sensitivity to detect disease activity in multiple sclerosis.
Chitnis T, Qureshi F, Gehman VM, Becich M, Bove R, Cree BAC, Gomez R, Hauser SL, Henry RG, Katrib A, Lokhande H, Paul A, Caillier SJ, Santaniello A, Sattarnezhad N, Saxena S, Weiner H, Yano H, Baranzini SE. Chitnis T, et al. Among authors: caillier sj. medRxiv [Preprint]. 2023 Jul 3:2023.06.28.23291157. doi: 10.1101/2023.06.28.23291157. medRxiv. 2023. Update in: Nat Commun. 2024 May 20;15(1):4297. doi: 10.1038/s41467-024-48602-9 PMID: 37461671 Free PMC article. Updated. Preprint.
Polygenic risk score association with multiple sclerosis susceptibility and phenotype in Europeans.
Shams H, Shao X, Santaniello A, Kirkish G, Harroud A, Ma Q, Isobe N; University of California San Francisco MS-EPIC Team; Schaefer CA, McCauley JL, Cree BAC, Didonna A, Baranzini SE, Patsopoulos NA, Hauser SL, Barcellos LF, Henry RG, Oksenberg JR. Shams H, et al. Brain. 2023 Feb 13;146(2):645-656. doi: 10.1093/brain/awac092. Brain. 2023. PMID: 35253861 Free PMC article.
Specific hypomethylation programs underpin B cell activation in early multiple sclerosis.
Ma Q, Caillier SJ, Muzic S; University of California San Francisco MS-EPIC Team; Wilson MR, Henry RG, Cree BAC, Hauser SL, Didonna A, Oksenberg JR. Ma Q, et al. Among authors: caillier sj. Proc Natl Acad Sci U S A. 2021 Dec 21;118(51):e2111920118. doi: 10.1073/pnas.2111920118. Proc Natl Acad Sci U S A. 2021. PMID: 34911760 Free PMC article.
84 results