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A novel interpretable deep learning-based computational framework designed synthetic enhancers with broad cross-species activity.
Li Z, Zhang Y, Peng B, Qin S, Zhang Q, Chen Y, Chen C, Bao Y, Zhu Y, Hong Y, Liu B, Liu Q, Xu L, Chen X, Ma X, Wang H, Xie L, Yao Y, Deng B, Li J, De B, Chen Y, Wang J, Li T, Liu R, Tang Z, Cao J, Zuo E, Mei C, Zhu F, Shao C, Wang G, Sun T, Wang N, Liu G, Ni JQ, Liu Y. Li Z, et al. Among authors: zhu y. Nucleic Acids Res. 2024 Oct 18:gkae912. doi: 10.1093/nar/gkae912. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39420601
Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages.
Trunova D, Borowska-Zuchowska N, Mykhailyk S, Xia K, Zhu Y, Sancho R, Rojek-Jelonek M, Garcia S, Wang K, Catalan P, Kovarik A, Hasterok R, Kolano B. Trunova D, et al. Among authors: zhu y. BMC Plant Biol. 2024 Oct 18;24(1):981. doi: 10.1186/s12870-024-05658-5. BMC Plant Biol. 2024. PMID: 39420249
Population-wide DNA methylation polymorphisms at single-nucleotide resolution in 207 cotton accessions reveal epigenomic contributions to complex traits.
Zhao T, Guan X, Hu Y, Zhang Z, Yang H, Shi X, Han J, Mei H, Wang L, Shao L, Wu H, Chen Q, Zhao Y, Pan J, Hao Y, Dong Z, Long X, Deng Q, Zhao S, Zhang M, Zhu Y, Ma X, Chen Z, Deng Y, Si Z, Li X, Zhang T, Gu F, Gu X, Fang L. Zhao T, et al. Among authors: zhu y. Cell Res. 2024 Oct 17. doi: 10.1038/s41422-024-01027-x. Online ahead of print. Cell Res. 2024. PMID: 39420233
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