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Page 1
Neuropeptide signalling orchestrates T cell differentiation.
Hou Y, Sun L, LaFleur MW, Huang L, Lambden C, Thakore PI, Geiger-Schuller K, Kimura K, Yan L, Zang Y, Tang R, Shi J, Barilla R, Deng L, Subramanian A, Wallrapp A, Choi HS, Kye YC, Ashenberg O, Schiebinger G, Doench JG, Chiu IM, Regev A, Sharpe AH, Kuchroo VK. Hou Y, et al. Among authors: schiebinger g. Nature. 2024 Nov;635(8038):444-452. doi: 10.1038/s41586-024-08049-w. Epub 2024 Oct 16. Nature. 2024. PMID: 39415015
Single-cell transcriptomics reveals evolutionary reconfiguration of embryonic cell fate specification in the sea urchin Heliocidaris erythrogramma.
Massri AJ, Berrio A, Afanassiev A, Greenstreet L, Pipho K, Byrne M, Schiebinger G, McClay DR, Wray GA. Massri AJ, et al. Among authors: schiebinger g. bioRxiv [Preprint]. 2024 May 1:2024.04.30.591752. doi: 10.1101/2024.04.30.591752. bioRxiv. 2024. Update in: Genome Biol Evol. 2025 Jan 6;17(1):evae258. doi: 10.1093/gbe/evae258 PMID: 38746376 Free PMC article. Updated. Preprint.
The dynamics of hematopoiesis over the human lifespan.
Li H, Côté P, Kuoch M, Ezike J, Frenis K, Afanassiev A, Greenstreet L, Tanaka-Yano M, Tarantino G, Zhang S, Whangbo J, Butty VL, Moiso E, Falchetti M, Lu K, Connelly GG, Morris V, Wang D, Chen AF, Bianchi G, Daley GQ, Garg S, Liu D, Chou ST, Regev A, Lummertz da Rocha E, Schiebinger G, Rowe RG. Li H, et al. Among authors: schiebinger g. Nat Methods. 2024 Dec 5. doi: 10.1038/s41592-024-02495-0. Online ahead of print. Nat Methods. 2024. PMID: 39639169
Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming.
Schiebinger G, Shu J, Tabaka M, Cleary B, Subramanian V, Solomon A, Gould J, Liu S, Lin S, Berube P, Lee L, Chen J, Brumbaugh J, Rigollet P, Hochedlinger K, Jaenisch R, Regev A, Lander ES. Schiebinger G, et al. Cell. 2019 Feb 7;176(4):928-943.e22. doi: 10.1016/j.cell.2019.01.006. Epub 2019 Jan 31. Cell. 2019. PMID: 30712874 Free PMC article.
Cellular population dynamics shape the route to human pluripotency.
Panariello F, Gagliano O, Luni C, Grimaldi A, Angiolillo S, Qin W, Manfredi A, Annunziata P, Slovin S, Vaccaro L, Riccardo S, Bouche V, Dionisi M, Salvi M, Martewicz S, Hu M, Cui M, Stuart H, Laterza C, Baruzzo G, Schiebinger G, Di Camillo B, Cacchiarelli D, Elvassore N. Panariello F, et al. Among authors: schiebinger g. Nat Commun. 2023 May 17;14(1):2829. doi: 10.1038/s41467-023-37270-w. Nat Commun. 2023. PMID: 37198156 Free PMC article.
Optimal transport analysis reveals trajectories in steady-state systems.
Zhang S, Afanassiev A, Greenstreet L, Matsumoto T, Schiebinger G. Zhang S, et al. Among authors: schiebinger g. PLoS Comput Biol. 2021 Dec 3;17(12):e1009466. doi: 10.1371/journal.pcbi.1009466. eCollection 2021 Dec. PLoS Comput Biol. 2021. PMID: 34860824 Free PMC article.
20 results