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A pan-genome and chromosome-length reference genome of narrow-leafed lupin (Lupinus angustifolius) reveals genomic diversity and insights into key industry and biological traits.
Garg G, Kamphuis LG, Bayer PE, Kaur P, Dudchenko O, Taylor CM, Frick KM, Foley RC, Gao LL, Aiden EL, Edwards D, Singh KB. Garg G, et al. Among authors: dudchenko o. Plant J. 2022 Sep;111(5):1252-1266. doi: 10.1111/tpj.15885. Epub 2022 Aug 11. Plant J. 2022. PMID: 35779281 Free PMC article.
Chromosome-length genome assembly and karyotype of the endangered black-footed ferret (Mustela nigripes).
Kliver S, Houck ML, Perelman PL, Totikov A, Tomarovsky A, Dudchenko O, Omer AD, Colaric Z, Weisz D, Aiden EL, Chan S, Hastie A, Komissarov A, Ryder OA, Graphodatsky A, Johnson WE, Maldonado JE, Pukazhenthi BS, Marinari PE, Wildt DE, Koepfli KP. Kliver S, et al. Among authors: dudchenko o. J Hered. 2023 Aug 23;114(5):539-548. doi: 10.1093/jhered/esad035. J Hered. 2023. PMID: 37249392 Free PMC article.
An unusually large genome from an unusually large stonefly: a chromosome-length genome assembly for the giant salmonfly, Pteronarcys californica (Plecoptera: Pteronarcyidae).
Eichert A, Sproul J, Tolman ER, Birrell J, Meek J, Heckenhauer J, Nelson CR, Dudchenko O, Jeong J, Weisz D, Aiden EL, Hotaling S, Ware JL, Frandsen PB. Eichert A, et al. Among authors: dudchenko o. J Hered. 2024 Aug 22:esae044. doi: 10.1093/jhered/esae044. Online ahead of print. J Hered. 2024. PMID: 39171826
High-quality reference genome for Clonorchis sinensis.
Young ND, Stroehlein AJ, Kinkar L, Wang T, Sohn WM, Chang BCH, Kaur P, Weisz D, Dudchenko O, Aiden EL, Korhonen PK, Gasser RB. Young ND, et al. Among authors: dudchenko o. Genomics. 2021 May;113(3):1605-1615. doi: 10.1016/j.ygeno.2021.03.001. Epub 2021 Mar 4. Genomics. 2021. PMID: 33677057 Free article.
De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome.
Lamb S, Taylor AM, Hughes TA, McMillan BR, Larsen RT, Khan R, Weisz D, Dudchenko O, Aiden EL, Edelman NB, Frandsen PB. Lamb S, et al. Among authors: dudchenko o. GigaByte. 2021 Nov 22;2021:gigabyte34. doi: 10.46471/gigabyte.34. eCollection 2021. GigaByte. 2021. PMID: 36824347 Free PMC article.
Chromosome-level genome of Schistosoma haematobium underpins genome-wide explorations of molecular variation.
Stroehlein AJ, Korhonen PK, Lee VV, Ralph SA, Mentink-Kane M, You H, McManus DP, Tchuenté LT, Stothard JR, Kaur P, Dudchenko O, Aiden EL, Yang B, Yang H, Emery AM, Webster BL, Brindley PJ, Rollinson D, Chang BCH, Gasser RB, Young ND. Stroehlein AJ, et al. Among authors: dudchenko o. PLoS Pathog. 2022 Feb 15;18(2):e1010288. doi: 10.1371/journal.ppat.1010288. eCollection 2022 Feb. PLoS Pathog. 2022. PMID: 35167626 Free PMC article.
61 results