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Three-color single-molecule localization microscopy in chromatin.
Acosta N, Gong R, Su Y, Frederick J, Medina K, Li WS, Mohammadian K, Almassalha L, Backman V. Acosta N, et al. Among authors: frederick j. bioRxiv [Preprint]. 2024 Sep 13:2024.09.09.612161. doi: 10.1101/2024.09.09.612161. bioRxiv. 2024. PMID: 39314277 Free PMC article. Preprint.
Disordered chromatin packing regulates phenotypic plasticity.
Virk RKA, Wu W, Almassalha LM, Bauer GM, Li Y, VanDerway D, Frederick J, Zhang D, Eshein A, Roy HK, Szleifer I, Backman V. Virk RKA, et al. Among authors: frederick j. Sci Adv. 2020 Jan 8;6(2):eaax6232. doi: 10.1126/sciadv.aax6232. eCollection 2020 Jan. Sci Adv. 2020. PMID: 31934628 Free PMC article.
Nanoscale chromatin imaging and analysis platform bridges 4D chromatin organization with molecular function.
Li Y, Eshein A, Virk RKA, Eid A, Wu W, Frederick J, VanDerway D, Gladstein S, Huang K, Shim AR, Anthony NM, Bauer GM, Zhou X, Agrawal V, Pujadas EM, Jain S, Esteve G, Chandler JE, Nguyen TQ, Bleher R, de Pablo JJ, Szleifer I, Dravid VP, Almassalha LM, Backman V. Li Y, et al. Among authors: frederick j. Sci Adv. 2021 Jan 1;7(1):eabe4310. doi: 10.1126/sciadv.abe4310. Print 2021 Jan. Sci Adv. 2021. PMID: 33523864 Free PMC article.
Author Correction: Analysis of three-dimensional chromatin packing domains by chromatin scanning transmission electron microscopy (ChromSTEM).
Li Y, Agrawal V, Virk RKA, Roth E, Li WS, Eshein A, Frederick J, Huang K, Almassalha L, Bleher R, Carignano MA, Szleifer I, Dravid VP, Backman V. Li Y, et al. Among authors: frederick j. Sci Rep. 2022 Jul 26;12(1):12720. doi: 10.1038/s41598-022-17293-x. Sci Rep. 2022. PMID: 35882912 Free PMC article. No abstract available.
Formamide denaturation of double-stranded DNA for fluorescence in situ hybridization (FISH) distorts nanoscale chromatin structure.
Shim AR, Frederick J, Pujadas EM, Kuo T, Ye IC, Pritchard JA, Dunton CL, Gonzalez PC, Acosta N, Jain S, Anthony NM, Almassalha LM, Szleifer I, Backman V. Shim AR, et al. Among authors: frederick j. PLoS One. 2024 May 28;19(5):e0301000. doi: 10.1371/journal.pone.0301000. eCollection 2024. PLoS One. 2024. PMID: 38805476 Free PMC article.
Leveraging chromatin packing domains to target chemoevasion in vivo.
Frederick J, Virk RKA, Ye IC, Almassalha LM, Wodarcyk GM, VanDerway D, Gonzalez PC, Nap RJ, Agrawal V, Anthony NM, Carinato J, Li WS, Dunton CL, Medina KI, Kakkaramadam R, Jain S, Shahabi S, Ameer G, Szleifer IG, Backman V. Frederick J, et al. bioRxiv [Preprint]. 2024 Nov 15:2024.11.14.623612. doi: 10.1101/2024.11.14.623612. bioRxiv. 2024. PMID: 39605341 Free PMC article. Preprint.
Chromatin conformation, gene transcription, and nucleosome remodeling as an emergent system.
Almassalha LM, Carignano M, Liwag EP, Li WS, Gong R, Acosta N, Dunton CL, Gonzalez PC, Carter LM, Kakkaramadam R, Kröger M, MacQuarrie KL, Frederick J, Ye IC, Su P, Kuo T, Medina KI, Pritchard JA, Skol A, Nap R, Kanemaki M, Dravid V, Szleifer I, Backman V. Almassalha LM, et al. Among authors: frederick j. Sci Adv. 2025 Jan 10;11(2):eadq6652. doi: 10.1126/sciadv.adq6652. Epub 2025 Jan 10. Sci Adv. 2025. PMID: 39792661 Free PMC article.
445 results