Jacob Machado D - Search Results

1

Unveiling putative modulators of mutable collagenous tissue in the brittle star Ophiomastix wendtii: an RNA-Seq analysis.

Nouri R, Mashanov V, Harris A, New G, Taylor W, Janies D, Reid RW, Jacob Machado D. Nouri R, et al. Among authors: jacob machado d. BMC Genomics. 2024 Oct 29;25(1):1013. doi: 10.1186/s12864-024-10926-7. BMC Genomics. 2024. PMID: 39472826 Free PMC article.

2

The Relationship between HERV, Interleukin, and Transcription Factor Expression in ZIKV Infected versus Uninfected Trophoblastic Cells.

Costa ALD, Prieto-Oliveira P, Duarte-Barbosa M, Andreata-Santos R, Peter CM, Prolo de Brito T, Antoneli F, Durães-Carvalho R, Briones MRS, Maricato JT, Zanotto PMA, Jacob Machado D, Janini LMR. Costa ALD, et al. Among authors: jacob machado d. Cells. 2024 Sep 5;13(17):1491. doi: 10.3390/cells13171491. Cells. 2024. PMID: 39273061 Free PMC article.

3

Editorial: Phylogenetics in the one health context.

Jacob Machado D, Jiménez-Ferbans L, Ocaña K, de Bernardi Schneider A. Jacob Machado D, et al. Front Microbiol. 2023 Oct 26;14:1307616. doi: 10.3389/fmicb.2023.1307616. eCollection 2023. Front Microbiol. 2023. PMID: 37965546 Free PMC article. No abstract available.

4

Echinoderm radial glia in adult cell renewal, indeterminate growth, and regeneration.

Mashanov V, Ademiluyi S, Jacob Machado D, Reid R, Janies D. Mashanov V, et al. Among authors: jacob machado d. Front Neural Circuits. 2023 Sep 29;17:1258370. doi: 10.3389/fncir.2023.1258370. eCollection 2023. Front Neural Circuits. 2023. PMID: 37841894 Free PMC article. Review.

5

Fundamentals of genomic epidemiology, lessons learned from the coronavirus disease 2019 (COVID-19) pandemic, and new directions.

Jacob Machado D, White RA 3rd, Kofsky J, Janies DA. Jacob Machado D, et al. Antimicrob Steward Healthc Epidemiol. 2021 Dec 7;1(1):e60. doi: 10.1017/ash.2021.222. eCollection 2021. Antimicrob Steward Healthc Epidemiol. 2021. PMID: 36168505 Free PMC article. Review.

6

Comparative Characterization of Mitogenomes From Five Orders of Cestodes (Eucestoda: Tapeworms).

Trevisan B, Jacob Machado D, Lahr DJG, Marques FPL. Trevisan B, et al. Among authors: jacob machado d. Front Genet. 2021 Dec 22;12:788871. doi: 10.3389/fgene.2021.788871. eCollection 2021. Front Genet. 2021. PMID: 35003223 Free PMC article.

7

An empirical test of the relationship between the bootstrap and likelihood ratio support in maximum likelihood phylogenetic analysis.

Jacob Machado D, Portella de Luna Marques F, Jiménez-Ferbans L, Grant T. Jacob Machado D, et al. Cladistics. 2022 Jun;38(3):392-401. doi: 10.1111/cla.12496. Epub 2021 Dec 21. Cladistics. 2022. PMID: 34932221 Free article.

8

Fundamental evolution of all Orthocoronavirinae including three deadly lineages descendent from Chiroptera-hosted coronaviruses: SARS-CoV, MERS-CoV and SARS-CoV-2.

Jacob Machado D, Scott R, Guirales S, Janies DA. Jacob Machado D, et al. Cladistics. 2021 Oct;37(5):461-488. doi: 10.1111/cla.12454. Epub 2021 Apr 26. Cladistics. 2021. PMID: 34570933 Free PMC article.

9

Evidence of absence treated as absence of evidence: The effects of variation in the number and distribution of gaps treated as missing data on the results of standard maximum likelihood analysis.

Jacob Machado D, Castroviejo-Fisher S, Grant T. Jacob Machado D, et al. Mol Phylogenet Evol. 2021 Jan;154:106966. doi: 10.1016/j.ympev.2020.106966. Epub 2020 Sep 22. Mol Phylogenet Evol. 2021. PMID: 32971285

10

FLAVi: An Enhanced Annotator for Viral Genomes of Flaviviridae.

de Bernadi Schneider A, Jacob Machado D, Guirales S, Janies DA. de Bernadi Schneider A, et al. Among authors: jacob machado d. Viruses. 2020 Aug 14;12(8):892. doi: 10.3390/v12080892. Viruses. 2020. PMID: 32824044 Free PMC article.

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