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Page 1
Programmable Protein Stabilization with Language Model-Derived Peptide Guides.
Hong L, Ye T, Wang TZ, Srijay D, Zhao L, Watson R, Vincoff S, Chen T, Kholina K, Goel S, DeLisa MP, Chatterjee P. Hong L, et al. Among authors: srijay d. Res Sq [Preprint]. 2024 Jul 26:rs.3.rs-4670386. doi: 10.21203/rs.3.rs-4670386/v1. Res Sq. 2024. PMID: 39108486 Free PMC article. Preprint.
De Novo Design of Peptide Binders to Conformationally Diverse Targets with Contrastive Language Modeling.
Bhat S, Palepu K, Hong L, Mao J, Ye T, Iyer R, Zhao L, Chen T, Vincoff S, Watson R, Wang T, Srijay D, Kavirayuni VS, Kholina K, Goel S, Vure P, Desphande AJ, Soderling SH, DeLisa MP, Chatterjee P. Bhat S, et al. Among authors: srijay d. bioRxiv [Preprint]. 2024 Jul 22:2023.06.26.546591. doi: 10.1101/2023.06.26.546591. bioRxiv. 2024. PMID: 39091799 Free PMC article. Preprint.
PepMLM: Target Sequence-Conditioned Generation of Therapeutic Peptide Binders via Span Masked Language Modeling.
Chen T, Dumas M, Watson R, Vincoff S, Peng C, Zhao L, Hong L, Pertsemlidis S, Shaepers-Cheu M, Wang TZ, Srijay D, Monticello C, Vure P, Pulugurta R, Kholina K, Goel S, DeLisa MP, Truant R, Aguilar HC, Chatterjee P. Chen T, et al. Among authors: srijay d. ArXiv [Preprint]. 2024 Aug 11:arXiv:2310.03842v3. ArXiv. 2024. PMID: 37873004 Free PMC article. Preprint.