Zhang HH - Search Results

1

Identification of an Allele-Specific Transcription Factor Binding Interaction that May Regulate PLA2G2A Gene Expression.

Hara A, Lu E, Johnstone L, Wei M, Sun S, Hallmark B, Watkins JC, Zhang HH, Yao G, Chilton FH. Hara A, et al. Among authors: zhang hh. Bioinform Biol Insights. 2024 Jul 30;18:11779322241261427. doi: 10.1177/11779322241261427. eCollection 2024. Bioinform Biol Insights. 2024. PMID: 39081667 Free PMC article.

2

binomialRF: interpretable combinatoric efficiency of random forests to identify biomarker interactions.

Rachid Zaim S, Kenost C, Berghout J, Chiu W, Wilson L, Zhang HH, Lussier YA. Rachid Zaim S, et al. Among authors: zhang hh. BMC Bioinformatics. 2020 Aug 28;21(1):374. doi: 10.1186/s12859-020-03718-9. BMC Bioinformatics. 2020. PMID: 32859146 Free PMC article.

3

eQTL networks unveil enriched mRNA master integrators downstream of complex disease-associated SNPs.

Li H, Pouladi N, Achour I, Gardeux V, Li J, Li Q, Zhang HH, Martinez FD, 'Skip' Garcia JGN, Lussier YA. Li H, et al. Among authors: zhang hh. J Biomed Inform. 2015 Dec;58:226-234. doi: 10.1016/j.jbi.2015.10.010. Epub 2015 Oct 30. J Biomed Inform. 2015. PMID: 26524128 Free PMC article.

4

Correction to: binomialRF: interpretable combinatoric efficiency of random forests to identify biomarker interactions.

Zaim SR, Kenost C, Berghout J, Chiu W, Wilson L, Zhang HH, Lussier YA. Zaim SR, et al. Among authors: zhang hh. BMC Bioinformatics. 2020 Nov 2;21(1):495. doi: 10.1186/s12859-020-03822-w. BMC Bioinformatics. 2020. PMID: 33138767 Free PMC article.

5

Personalized beyond Precision: Designing Unbiased Gold Standards to Improve Single-Subject Studies of Personal Genome Dynamics from Gene Products.

Rachid Zaim S, Kenost C, Zhang HH, Lussier YA. Rachid Zaim S, et al. Among authors: zhang hh. J Pers Med. 2020 Dec 31;11(1):24. doi: 10.3390/jpm11010024. J Pers Med. 2020. PMID: 33396440 Free PMC article.

6

txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility.

Zhang H, Mulqueen RM, Iannuzo N, Farrera DO, Polverino F, Galligan JJ, Ledford JG, Adey AC, Cusanovich DA. Zhang H, et al. Genome Biol. 2024 Mar 22;25(1):78. doi: 10.1186/s13059-023-03150-1. Genome Biol. 2024. PMID: 38519979 Free PMC article.

7

kMEn: Analyzing noisy and bidirectional transcriptional pathway responses in single subjects.

Li Q, Schissler AG, Gardeux V, Berghout J, Achour I, Kenost C, Li H, Zhang HH, Lussier YA. Li Q, et al. Among authors: zhang hh. J Biomed Inform. 2017 Feb;66:32-41. doi: 10.1016/j.jbi.2016.12.009. Epub 2016 Dec 19. J Biomed Inform. 2017. PMID: 28007582 Free PMC article.

8

Extensive evaluation of ATAC-seq protocols for native or formaldehyde-fixed nuclei.

Zhang H, Rice ME, Alvin JW, Farrera-Gaffney D, Galligan JJ, Johnson MDL, Cusanovich DA. Zhang H, et al. BMC Genomics. 2022 Mar 17;23(1):214. doi: 10.1186/s12864-021-08266-x. BMC Genomics. 2022. PMID: 35296236 Free PMC article.

9

N-of-1-pathways MixEnrich: advancing precision medicine via single-subject analysis in discovering dynamic changes of transcriptomes.

Li Q, Schissler AG, Gardeux V, Achour I, Kenost C, Berghout J, Li H, Zhang HH, Lussier YA. Li Q, et al. Among authors: zhang hh. BMC Med Genomics. 2017 May 24;10(Suppl 1):27. doi: 10.1186/s12920-017-0263-4. BMC Med Genomics. 2017. PMID: 28589853 Free PMC article.

10

Robust brain MRI image classification with SIBOW-SVM.

Zeng L, Zhang HH. Zeng L, et al. Among authors: zhang hh. Comput Med Imaging Graph. 2024 Dec;118:102451. doi: 10.1016/j.compmedimag.2024.102451. Epub 2024 Oct 24. Comput Med Imaging Graph. 2024. PMID: 39515189

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