Chong Z - Search Results

1

Molecular differentiation between complete and incomplete responders to neoadjuvant therapy in rectal cancer.

Chong Z, Huang F, McLeod M, Irwin R, Smithson M, Yue Z, Gao M, Hardiman K. Chong Z, et al. Res Sq [Preprint]. 2024 Jul 1:rs.3.rs-4456000. doi: 10.21203/rs.3.rs-4456000/v1. Res Sq. 2024. PMID: 39011117 Free PMC article. Preprint.

2

Body Weight Correlates with Molecular Variances in Patients with Cancer.

Huang F, Xu P, Yue Z, Song Y, Hu K, Zhao X, Gao M, Chong Z. Huang F, et al. Among authors: chong z. Cancer Res. 2024 Mar 4;84(5):757-770. doi: 10.1158/0008-5472.CAN-23-1463. Cancer Res. 2024. PMID: 38190709 Free PMC article.

3

ClipSV: improving structural variation detection by read extension, spliced alignment and tree-based decision rules.

Xu P, Chen Y, Gao M, Chong Z. Xu P, et al. Among authors: chong z. NAR Genom Bioinform. 2021 Feb 1;3(1):lqab003. doi: 10.1093/nargab/lqab003. eCollection 2021 Mar. NAR Genom Bioinform. 2021. PMID: 33554118 Free PMC article.

4

B-assembler: a circular bacterial genome assembler.

Huang F, Xiao L, Gao M, Vallely EJ, Dybvig K, Atkinson TP, Waites KB, Chong Z. Huang F, et al. Among authors: chong z. BMC Genomics. 2022 May 11;23(Suppl 4):361. doi: 10.1186/s12864-022-08577-7. BMC Genomics. 2022. PMID: 35546658 Free PMC article.

5

Accurate long-read de novo assembly evaluation with Inspector.

Chen Y, Zhang Y, Wang AY, Gao M, Chong Z. Chen Y, et al. Among authors: chong z. Genome Biol. 2021 Nov 14;22(1):312. doi: 10.1186/s13059-021-02527-4. Genome Biol. 2021. PMID: 34775997 Free PMC article.

6

Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak.

Chen Y, Wang AY, Barkley CA, Zhang Y, Zhao X, Gao M, Edmonds MD, Chong Z. Chen Y, et al. Among authors: chong z. Nat Commun. 2023 Jan 17;14(1):283. doi: 10.1038/s41467-023-35996-1. Nat Commun. 2023. PMID: 36650186 Free PMC article.

7

Single-cell isolation by a modular single-cell pipette for RNA-sequencing.

Zhang K, Gao M, Chong Z, Li Y, Han X, Chen R, Qin L. Zhang K, et al. Among authors: chong z. Lab Chip. 2016 Nov 29;16(24):4742-4748. doi: 10.1039/c6lc01241h. Lab Chip. 2016. PMID: 27841430 Free PMC article.

8

MRLR: unraveling high-resolution meiotic recombination by linked reads.

Xu P, Kennell T, Gao M; Human Genome Structural Variation Consortium; Kimberly RP, Chong Z. Xu P, et al. Among authors: chong z. Bioinformatics. 2020 Jan 1;36(1):10-16. doi: 10.1093/bioinformatics/btz503. Bioinformatics. 2020. PMID: 31214684 Free PMC article.

9

The evolution of small insertions and deletions in the coding genes of Drosophila melanogaster.

Chong Z, Zhai W, Li C, Gao M, Gong Q, Ruan J, Li J, Jiang L, Lv X, Hungate E, Wu CI. Chong Z, et al. Mol Biol Evol. 2013 Dec;30(12):2699-708. doi: 10.1093/molbev/mst167. Epub 2013 Sep 26. Mol Biol Evol. 2013. PMID: 24077769

10

novoBreak: local assembly for breakpoint detection in cancer genomes.

Chong Z, Ruan J, Gao M, Zhou W, Chen T, Fan X, Ding L, Lee AY, Boutros P, Chen J, Chen K. Chong Z, et al. Nat Methods. 2017 Jan;14(1):65-67. doi: 10.1038/nmeth.4084. Epub 2016 Nov 28. Nat Methods. 2017. PMID: 27892959 Free PMC article.

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