Haller BC - Search Results

1

e3SIM: epidemiological-ecological-evolutionary simulation framework for genomic epidemiology.

Xu P, Liang S, Hahn A, Zhao V, Lo WT', Haller BC, Sobkowiak B, Chitwood MH, Colijn C, Cohen T, Rhee KY, Messer PW, Wells MT, Clark AG, Kim J. Xu P, et al. Among authors: haller bc. bioRxiv [Preprint]. 2024 Jul 2:2024.06.29.601123. doi: 10.1101/2024.06.29.601123. bioRxiv. 2024. PMID: 39005464 Free PMC article. Preprint.

2

SLiM 2: Flexible, Interactive Forward Genetic Simulations.

Haller BC, Messer PW. Haller BC, et al. Mol Biol Evol. 2017 Jan;34(1):230-240. doi: 10.1093/molbev/msw211. Epub 2016 Oct 3. Mol Biol Evol. 2017. PMID: 27702775

3

asymptoticMK: A Web-Based Tool for the Asymptotic McDonald-Kreitman Test.

Haller BC, Messer PW. Haller BC, et al. G3 (Bethesda). 2017 May 5;7(5):1569-1575. doi: 10.1534/g3.117.039693. G3 (Bethesda). 2017. PMID: 28341700 Free PMC article.

4

SLiM 3: Forward Genetic Simulations Beyond the Wright-Fisher Model.

Haller BC, Messer PW. Haller BC, et al. Mol Biol Evol. 2019 Mar 1;36(3):632-637. doi: 10.1093/molbev/msy228. Mol Biol Evol. 2019. PMID: 30517680 Free PMC article.

5

Tree-sequence recording in SLiM opens new horizons for forward-time simulation of whole genomes.

Haller BC, Galloway J, Kelleher J, Messer PW, Ralph PL. Haller BC, et al. Mol Ecol Resour. 2019 Mar;19(2):552-566. doi: 10.1111/1755-0998.12968. Epub 2019 Feb 21. Mol Ecol Resour. 2019. PMID: 30565882 Free PMC article.

6

Evolutionary Modeling in SLiM 3 for Beginners.

Haller BC, Messer PW. Haller BC, et al. Mol Biol Evol. 2019 May 1;36(5):1101-1109. doi: 10.1093/molbev/msy237. Mol Biol Evol. 2019. PMID: 30590560 Free PMC article.

7

Migration restores hybrid incompatibility driven by mitochondrial-nuclear sexual conflict.

Munasinghe M, Haller BC, Clark AG. Munasinghe M, et al. Among authors: haller bc. Proc Biol Sci. 2022 Jan 26;289(1967):20212561. doi: 10.1098/rspb.2021.2561. Epub 2022 Jan 26. Proc Biol Sci. 2022. PMID: 35078356 Free PMC article.

8

Population genetics meets ecology: a guide to individual-based simulations in continuous landscapes.

Chevy ET, Min J, Caudill V, Champer SE, Haller BC, Rehmann CT, Smith CCR, Tittes S, Messer PW, Kern AD, Ramachandran S, Ralph PL. Chevy ET, et al. Among authors: haller bc. bioRxiv [Preprint]. 2024 Jul 24:2024.07.24.604988. doi: 10.1101/2024.07.24.604988. bioRxiv. 2024. PMID: 39091875 Free PMC article. Preprint.

9

slendr: a framework for spatio-temporal population genomic simulations on geographic landscapes.

Petr M, Haller BC, Ralph PL, Racimo F. Petr M, et al. Among authors: haller bc. Peer Community J. 2023;3:e121. doi: 10.24072/pcjournal.354. Epub 2023 Dec 15. Peer Community J. 2023. PMID: 38984034 Free PMC article.

10

Gaussian Process Emulation for Modeling Dengue Outbreak Dynamics.

Langmüller AM, Chandrasekher KA, Haller BC, Champer SE, Murdock CC, Messer PW. Langmüller AM, et al. Among authors: haller bc. medRxiv [Preprint]. 2024 Nov 29:2024.11.28.24318136. doi: 10.1101/2024.11.28.24318136. medRxiv. 2024. PMID: 39649594 Free PMC article. Preprint.

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