Li H - Search Results

1

LDER-GE estimates phenotypic variance component of gene-environment interactions in human complex traits accurately with GE interaction summary statistics and full LD information.

Dong Z, Jiang W, Li H, DeWan AT, Zhao H. Dong Z, et al. Among authors: li h. Brief Bioinform. 2024 May 23;25(4):bbae335. doi: 10.1093/bib/bbae335. Brief Bioinform. 2024. PMID: 38980374 Free PMC article.

2

A Markov random field model for network-based differential expression analysis of single-cell RNA-seq data.

Li H, Zhu B, Xu Z, Adams T, Kaminski N, Zhao H. Li H, et al. BMC Bioinformatics. 2021 Oct 26;22(1):524. doi: 10.1186/s12859-021-04412-0. BMC Bioinformatics. 2021. PMID: 34702190 Free PMC article.

3

A Markov random field model-based approach for differentially expressed gene detection from single-cell RNA-seq data.

Zhu B, Li H, Zhang L, Chandra SS, Zhao H. Zhu B, et al. Among authors: li h. Brief Bioinform. 2022 Sep 20;23(5):bbac166. doi: 10.1093/bib/bbac166. Brief Bioinform. 2022. PMID: 35514182 Free PMC article.

4

Network assisted analysis of de novo variants using protein-protein interaction information identified 46 candidate genes for congenital heart disease.

Xie Y, Jiang W, Dong W, Li H, Jin SC, Brueckner M, Zhao H. Xie Y, et al. Among authors: li h. PLoS Genet. 2022 Jun 7;18(6):e1010252. doi: 10.1371/journal.pgen.1010252. eCollection 2022 Jun. PLoS Genet. 2022. PMID: 35671298 Free PMC article.

5

Evaluating the Utilities of Foundation Models in Single-cell Data Analysis.

Liu T, Li K, Wang Y, Li H, Zhao H. Liu T, et al. Among authors: li h, li k. bioRxiv [Preprint]. 2024 Dec 10:2023.09.08.555192. doi: 10.1101/2023.09.08.555192. bioRxiv. 2024. PMID: 38464157 Free PMC article. Preprint.

6

Statistical methods for assessing the effects of de novo variants on birth defects.

Xie Y, Wu R, Li H, Dong W, Zhou G, Zhao H. Xie Y, et al. Among authors: li h. Hum Genomics. 2024 Mar 14;18(1):25. doi: 10.1186/s40246-024-00590-z. Hum Genomics. 2024. PMID: 38486307 Free PMC article. Review.

7

HBI: a hierarchical Bayesian interaction model to estimate cell-type-specific methylation quantitative trait loci incorporating priors from cell-sorted bisulfite sequencing data.

Cheng Y, Cai B, Li H, Zhang X, D'Souza G, Shrestha S, Edmonds A, Meyers J, Fischl M, Kassaye S, Anastos K, Cohen M, Aouizerat BE, Xu K, Zhao H. Cheng Y, et al. Among authors: li h. Genome Biol. 2024 Oct 15;25(1):273. doi: 10.1186/s13059-024-03411-7. Genome Biol. 2024. PMID: 39407252 Free PMC article.

8

The left amygdala is genetically sexually-dimorphic: multi-omics analysis of structural MRI volumes.

Gui Y, Zhou G, Cui S, Li H, Lu H, Zhao H. Gui Y, et al. Among authors: li h. Transl Psychiatry. 2025 Jan 22;15(1):17. doi: 10.1038/s41398-025-03223-8. Transl Psychiatry. 2025. PMID: 39843917 Free PMC article.

9

Rational Redomestication for Future Agriculture.

Wang N, Li H, Huang S. Wang N, et al. Among authors: li h. Annu Rev Plant Biol. 2025 Feb 3. doi: 10.1146/annurev-arplant-083123-064726. Online ahead of print. Annu Rev Plant Biol. 2025. PMID: 39899852 Review.

10

VANGL2 alleviates inflammatory bowel disease by recruiting the ubiquitin ligase MARCH8 to limit NLRP3 inflammasome activation through OPTN-mediated selective autophagy.

Jiang H, Xie Y, Hu Z, Lu J, Zhang J, Li H, Zeng K, Peng W, Yang C, Huang J, Han Z, Bai X, Yu X. Jiang H, et al. Among authors: li h. PLoS Biol. 2025 Feb 3;23(2):e3002961. doi: 10.1371/journal.pbio.3002961. eCollection 2025 Feb. PLoS Biol. 2025. PMID: 39899477

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