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Optimizing single-cell RNA sequencing methods for human colon biopsies: droplet-based vs. picowell-based platforms.
bioRxiv [Preprint]. 2024 Jun 28:2024.06.24.600526. doi: 10.1101/2024.06.24.600526.
bioRxiv. 2024.
PMID: 38979379
Free PMC article.
Preprint.
Select symbionts drive high IgA levels in the mouse intestine.
Zhang S, Han Y, Schofield W, Nicosia M, Karell PE, Newhall KP, Zhou JY, Musich RJ, Pan S, Valujskikh A, Sangwan N, Dwidar M, Lu Q, Stappenbeck TS.
Zhang S, et al. Among authors: musich rj.
Cell Host Microbe. 2023 Oct 11;31(10):1620-1638.e7. doi: 10.1016/j.chom.2023.09.001. Epub 2023 Sep 29.
Cell Host Microbe. 2023.
PMID: 37776865
Free article.
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Reverse translation approach generates a signature of penetrating fibrosis in Crohn's disease that is associated with anti-TNF response.
Xiong S, Whitehurst CE, Li L, Heo GS, Lai CW, Jain U, Muegge BD, Espenschied ST, Musich RJ, Chen M, Liu Y, Liu TC, Stappenbeck TS.
Xiong S, et al. Among authors: musich rj.
Gut. 2022 Jul;71(7):1289-1301. doi: 10.1136/gutjnl-2020-323405. Epub 2021 Jul 14.
Gut. 2022.
PMID: 34261752
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SELfies and CELLfies: Whole Genome Sequencing and Annotation of Five Antibiotic Resistant Bacteria Isolated from the Surfaces of Smartphones, An Inquiry Based Laboratory Exercise in a Genomics Undergraduate Course at the Rochester Institute of Technology.
Parthasarathy A, Wong NH, Weiss AN, Tian S, Ali SE, Cavanaugh NT, Chinsky TM, Cramer CE, Gupta A, Jha R, Johnson LK, Tuason ED, Klafehn LM, Krishnadas V, Musich RJ, Pfaff JM, Richman SC, Shumway AJ, Hudson AO.
Parthasarathy A, et al. Among authors: musich rj.
J Genomics. 2019 Feb 19;7:26-30. doi: 10.7150/jgen.31911. eCollection 2019.
J Genomics. 2019.
PMID: 30820259
Free PMC article.
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