Jones A - Search Results

1

Genomic determinants, architecture, and constraints in drought-related traits in Corymbia calophylla.

Ahrens CW, Murray K, Mazanec RA, Ferguson S, Jones A, Tissue DT, Byrne M, Borevitz JO, Rymer PD. Ahrens CW, et al. Among authors: jones a. BMC Genomics. 2024 Jun 27;25(1):640. doi: 10.1186/s12864-024-10531-8. BMC Genomics. 2024. PMID: 38937661 Free PMC article.

2

Landscape drivers of genomic diversity and divergence in woodland Eucalyptus.

Murray KD, Janes JK, Jones A, Bothwell HM, Andrew RL, Borevitz JO. Murray KD, et al. Among authors: jones a. Mol Ecol. 2019 Dec;28(24):5232-5247. doi: 10.1111/mec.15287. Epub 2019 Nov 17. Mol Ecol. 2019. PMID: 31647597 Free PMC article.

3

Spatial, climate and ploidy factors drive genomic diversity and resilience in the widespread grass Themeda triandra.

Ahrens CW, James EA, Miller AD, Scott F, Aitken NC, Jones AW, Lu-Irving P, Borevitz JO, Cantrill DJ, Rymer PD. Ahrens CW, et al. Among authors: jones aw. Mol Ecol. 2020 Oct;29(20):3872-3888. doi: 10.1111/mec.15614. Epub 2020 Sep 16. Mol Ecol. 2020. PMID: 32885504

4

High-molecular weight DNA extraction, clean-up and size selection for long-read sequencing.

Jones A, Torkel C, Stanley D, Nasim J, Borevitz J, Schwessinger B. Jones A, et al. PLoS One. 2021 Jul 15;16(7):e0253830. doi: 10.1371/journal.pone.0253830. eCollection 2021. PLoS One. 2021. PMID: 34264958 Free PMC article.

5

The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia.

Phillips AL, Ferguson S, Watson-Haigh NS, Jones AW, Borevitz JO, Burton RA, Atwell BJ. Phillips AL, et al. Among authors: jones aw. Sci Rep. 2022 Jun 25;12(1):10823. doi: 10.1038/s41598-022-14893-5. Sci Rep. 2022. PMID: 35752642 Free PMC article.

6

Interspecies genome divergence is predominantly due to frequent small scale rearrangements in Eucalyptus.

Ferguson S, Jones A, Murray K, Schwessinger B, Borevitz JO. Ferguson S, et al. Among authors: jones a. Mol Ecol. 2023 Mar;32(6):1271-1287. doi: 10.1111/mec.16608. Epub 2022 Jul 21. Mol Ecol. 2023. PMID: 35810343

7

Species-specific basecallers improve actual accuracy of nanopore sequencing in plants.

Ferguson S, McLay T, Andrew RL, Bruhl JJ, Schwessinger B, Borevitz J, Jones A. Ferguson S, et al. Among authors: jones a. Plant Methods. 2022 Dec 14;18(1):137. doi: 10.1186/s13007-022-00971-2. Plant Methods. 2022. PMID: 36517904 Free PMC article.

8

Cost-conscious generation of multiplexed short-read DNA libraries for whole-genome sequencing.

Jones A, Stanley D, Ferguson S, Schwessinger B, Borevitz J, Warthmann N. Jones A, et al. PLoS One. 2023 Jan 27;18(1):e0280004. doi: 10.1371/journal.pone.0280004. eCollection 2023. PLoS One. 2023. PMID: 36706059 Free PMC article.

9

Plant genome evolution in the genus Eucalyptus is driven by structural rearrangements that promote sequence divergence.

Ferguson S, Jones A, Murray K, Andrew R, Schwessinger B, Borevitz J. Ferguson S, et al. Among authors: jones a. Genome Res. 2024 May 15;34(4):606-619. doi: 10.1101/gr.277999.123. Genome Res. 2024. PMID: 38589251 Free PMC article.

10

Exploring the role of polymorphic interspecies structural variants in reproductive isolation and adaptive divergence in Eucalyptus.

Ferguson S, Jones A, Murray K, Andrew RL, Schwessinger B, Bothwell H, Borevitz J. Ferguson S, et al. Among authors: jones a. Gigascience. 2024 Jan 2;13:giae029. doi: 10.1093/gigascience/giae029. Gigascience. 2024. PMID: 38869149 Free PMC article.

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