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Interactive data exploration websites for large-scale electrophysiology.
Birman D, Chapuis G, Faulkner M, Rossant C; International Brain Laboratory; Benson J, Catarino JA, Churchland AK, Hu F, Huntenburg JM, Khanal A, Krasniak C, Lau PYP, Meijer GT, Miska NJ, Noel JP, Pan-Vazquez A, Roth N, Schartner M, Socha KZ, Steinmetz NA, Urai AE, Wells MJ, West SJ, Winter O. Birman D, et al. Among authors: catarino ja. bioRxiv [Preprint]. 2024 Jun 14:2024.06.07.597950. doi: 10.1101/2024.06.07.597950. bioRxiv. 2024. PMID: 38915704 Free PMC article. Preprint.
A modular architecture for organizing, processing and sharing neurophysiology data.
International Brain Laboratory; Bonacchi N, Chapuis GA, Churchland AK, DeWitt EEJ, Faulkner M, Harris KD, Huntenburg JM, Hunter M, Laranjeira IC, Rossant C, Sasaki M, Schartner MM, Shen S, Steinmetz NA, Walker EY, West SJ, Winter O, Wells MJ. International Brain Laboratory, et al. Nat Methods. 2023 Mar;20(3):403-407. doi: 10.1038/s41592-022-01742-6. Epub 2023 Mar 2. Nat Methods. 2023. PMID: 36864199 Free PMC article.
An adaptable, reusable, and light implant for chronic Neuropixels probes.
Bimbard C, Takács F, Catarino JA, Fabre JMJ, Gupta S, Lenzi SC, Melin MD, O'Neill N, Orsolic I, Robacha M, Street JS, Teixeira J, Townsend S, van Beest EH, Zhang AM, Churchland AK, Duan CA, Harris KD, Kullmann DM, Lignani G, Mainen ZF, Margrie TW, Rochefort NL, Wikenheiser AM, Carandini M, Coen P. Bimbard C, et al. Among authors: catarino ja. bioRxiv [Preprint]. 2024 Nov 18:2023.08.03.551752. doi: 10.1101/2023.08.03.551752. bioRxiv. 2024. PMID: 37577563 Free PMC article. Preprint.
Lightning Pose: improved animal pose estimation via semi-supervised learning, Bayesian ensembling and cloud-native open-source tools.
Biderman D, Whiteway MR, Hurwitz C, Greenspan N, Lee RS, Vishnubhotla A, Warren R, Pedraja F, Noone D, Schartner MM, Huntenburg JM, Khanal A, Meijer GT, Noel JP, Pan-Vazquez A, Socha KZ, Urai AE; International Brain Laboratory; Cunningham JP, Sawtell NB, Paninski L. Biderman D, et al. Nat Methods. 2024 Jul;21(7):1316-1328. doi: 10.1038/s41592-024-02319-1. Epub 2024 Jun 25. Nat Methods. 2024. PMID: 38918605