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Deconwolf enables high-performance deconvolution of widefield fluorescence microscopy images.
Wernersson E, Gelali E, Girelli G, Wang S, Castillo D, Mattsson Langseth C, Verron Q, Nguyen HQ, Chattoraj S, Martinez Casals A, Blom H, Lundberg E, Nilsson M, Marti-Renom MA, Wu CT, Crosetto N, Bienko M. Wernersson E, et al. Among authors: castillo d. Nat Methods. 2024 Jul;21(7):1245-1256. doi: 10.1038/s41592-024-02294-7. Epub 2024 Jun 6. Nat Methods. 2024. PMID: 38844629 Free PMC article.
3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing.
Nguyen HQ, Chattoraj S, Castillo D, Nguyen SC, Nir G, Lioutas A, Hershberg EA, Martins NMC, Reginato PL, Hannan M, Beliveau BJ, Church GM, Daugharthy ER, Marti-Renom MA, Wu CT. Nguyen HQ, et al. Among authors: castillo d. Nat Methods. 2020 Aug;17(8):822-832. doi: 10.1038/s41592-020-0890-0. Epub 2020 Jul 27. Nat Methods. 2020. PMID: 32719531 Free PMC article.
3D reconstruction of genomic regions from sparse interaction data.
Mendieta-Esteban J, Di Stefano M, Castillo D, Farabella I, Marti-Renom MA. Mendieta-Esteban J, et al. Among authors: castillo d. NAR Genom Bioinform. 2021 Mar 22;3(1):lqab017. doi: 10.1093/nargab/lqab017. eCollection 2021 Mar. NAR Genom Bioinform. 2021. PMID: 33778492 Free PMC article.
4D Genome Rewiring during Oncogene-Induced and Replicative Senescence.
Sati S, Bonev B, Szabo Q, Jost D, Bensadoun P, Serra F, Loubiere V, Papadopoulos GL, Rivera-Mulia JC, Fritsch L, Bouret P, Castillo D, Gelpi JL, Orozco M, Vaillant C, Pellestor F, Bantignies F, Marti-Renom MA, Gilbert DM, Lemaitre JM, Cavalli G. Sati S, et al. Among authors: castillo d. Mol Cell. 2020 May 7;78(3):522-538.e9. doi: 10.1016/j.molcel.2020.03.007. Epub 2020 Mar 26. Mol Cell. 2020. PMID: 32220303 Free PMC article.
XopAE Effector from Xanthomonas phaseoli pv. manihotis Targets HSP20-Like p23 Cochaperone to Suppress Plant Basal Immunity.
Gomez De la Cruz D, Castillo DA, Trujillo B CA, Medina CA, Hurtado V, Gil J, Padmanabhan M, Restrepo S, Dinesh-Kumar SP, Germain H, Lopez C, Bernal A. Gomez De la Cruz D, et al. Among authors: castillo da. Mol Plant Microbe Interact. 2025 Jan 21. doi: 10.1094/MPMI-08-24-0086-R. Online ahead of print. Mol Plant Microbe Interact. 2025. PMID: 39836062 Free article.
921 results