Sorger PK - Search Results

1

Nociceptor-immune interactomes reveal insult-specific immune signatures of pain.

Jain A, Gyori BM, Hakim S, Jain A, Sun L, Petrova V, Bhuiyan SA, Zhen S, Wang Q, Kawaguchi R, Bunga S, Taub DG, Ruiz-Cantero MC, Tong-Li C, Andrews N, Kotoda M, Renthal W, Sorger PK, Woolf CJ. Jain A, et al. Among authors: sorger pk. Nat Immunol. 2024 Jul;25(7):1296-1305. doi: 10.1038/s41590-024-01857-2. Epub 2024 May 28. Nat Immunol. 2024. PMID: 38806708 Free PMC article.

2

From word models to executable models of signaling networks using automated assembly.

Gyori BM, Bachman JA, Subramanian K, Muhlich JL, Galescu L, Sorger PK. Gyori BM, et al. Among authors: sorger pk. Mol Syst Biol. 2017 Nov 24;13(11):954. doi: 10.15252/msb.20177651. Mol Syst Biol. 2017. PMID: 29175850 Free PMC article.

3

Encoding Growth Factor Identity in the Temporal Dynamics of FOXO3 under the Combinatorial Control of ERK and AKT Kinases.

Sampattavanich S, Steiert B, Kramer BA, Gyori BM, Albeck JG, Sorger PK. Sampattavanich S, et al. Among authors: sorger pk. Cell Syst. 2018 Jun 27;6(6):664-678.e9. doi: 10.1016/j.cels.2018.05.004. Epub 2018 Jun 6. Cell Syst. 2018. PMID: 29886111 Free PMC article.

4

FamPlex: a resource for entity recognition and relationship resolution of human protein families and complexes in biomedical text mining.

Bachman JA, Gyori BM, Sorger PK. Bachman JA, et al. Among authors: sorger pk. BMC Bioinformatics. 2018 Jun 28;19(1):248. doi: 10.1186/s12859-018-2211-5. BMC Bioinformatics. 2018. PMID: 29954318 Free PMC article.

5

INDRA-IPM: interactive pathway modeling using natural language with automated assembly.

Todorov PV, Gyori BM, Bachman JA, Sorger PK. Todorov PV, et al. Among authors: sorger pk. Bioinformatics. 2019 Nov 1;35(21):4501-4503. doi: 10.1093/bioinformatics/btz289. Bioinformatics. 2019. PMID: 31070726 Free PMC article.

6

GeneWalk identifies relevant gene functions for a biological context using network representation learning.

Ietswaart R, Gyori BM, Bachman JA, Sorger PK, Churchman LS. Ietswaart R, et al. Among authors: sorger pk. Genome Biol. 2021 Feb 2;22(1):55. doi: 10.1186/s13059-021-02264-8. Genome Biol. 2021. PMID: 33526072 Free PMC article.

7

Integrating multi-omics data reveals function and therapeutic potential of deubiquitinating enzymes.

Doherty LM, Mills CE, Boswell SA, Liu X, Hoyt CT, Gyori B, Buhrlage SJ, Sorger PK. Doherty LM, et al. Among authors: sorger pk. Elife. 2022 Jun 23;11:e72879. doi: 10.7554/eLife.72879. Elife. 2022. PMID: 35737447 Free PMC article.

8

Nociceptor neuroimmune interactomes reveal cell type- and injury-specific inflammatory pain pathways.

Jain A, Gyori BM, Hakim S, Bunga S, Taub DG, Ruiz-Cantero MC, Tong-Li C, Andrews N, Sorger PK, Woolf CJ. Jain A, et al. Among authors: sorger pk. bioRxiv [Preprint]. 2023 Feb 3:2023.02.01.526526. doi: 10.1101/2023.02.01.526526. bioRxiv. 2023. PMID: 36778477 Free PMC article. Preprint.

9

Automated assembly of molecular mechanisms at scale from text mining and curated databases.

Bachman JA, Gyori BM, Sorger PK. Bachman JA, et al. Among authors: sorger pk. Mol Syst Biol. 2023 May 9;19(5):e11325. doi: 10.15252/msb.202211325. Epub 2023 Mar 20. Mol Syst Biol. 2023. PMID: 36938926 Free PMC article.

10

Non-genetic origins of cell-to-cell variability in TRAIL-induced apoptosis.

Spencer SL, Gaudet S, Albeck JG, Burke JM, Sorger PK. Spencer SL, et al. Among authors: sorger pk. Nature. 2009 May 21;459(7245):428-32. doi: 10.1038/nature08012. Epub 2009 Apr 12. Nature. 2009. PMID: 19363473 Free PMC article.

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