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MHC-Fine: Fine-tuned AlphaFold for precise MHC-peptide complex prediction.
Glukhov E, Kalitin D, Stepanenko D, Zhu Y, Nguyen T, Jones G, Patsahan T, Simmerling C, Mitchell JC, Vajda S, Dill KA, Padhorny D, Kozakov D. Glukhov E, et al. Among authors: nguyen t. Biophys J. 2024 Sep 3;123(17):2902-2909. doi: 10.1016/j.bpj.2024.05.011. Epub 2024 May 15. Biophys J. 2024. PMID: 38751115
Conservation of binding properties in protein models.
Egbert M, Porter KA, Ghani U, Kotelnikov S, Nguyen T, Ashizawa R, Kozakov D, Vajda S. Egbert M, et al. Among authors: nguyen t. Comput Struct Biotechnol J. 2021 Apr 25;19:2549-2566. doi: 10.1016/j.csbj.2021.04.048. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34025942 Free PMC article.
Assessing the binding properties of CASP14 targets and models.
Egbert M, Ghani U, Ashizawa R, Kotelnikov S, Nguyen T, Desta I, Hashemi N, Padhorny D, Kozakov D, Vajda S. Egbert M, et al. Among authors: nguyen t. Proteins. 2021 Dec;89(12):1922-1939. doi: 10.1002/prot.26209. Epub 2021 Aug 19. Proteins. 2021. PMID: 34368994 Free PMC article.
A gut pathobiont regulates circulating glycine and host metabolism in a twin study comparing vegan and omnivorous diets.
Carter MM, Zeng X, Ward CP, Landry M, Perelman D, Hennings T, Meng X, Weakley AM, Cabrera AV, Robinson JL, Nguyen T, Higginbottom S, Maecker HT, Sonnenburg ED, Fischbach MA, Gardner CD, Sonnenburg JL. Carter MM, et al. Among authors: nguyen t. medRxiv [Preprint]. 2025 Jan 12:2025.01.08.25320192. doi: 10.1101/2025.01.08.25320192. medRxiv. 2025. PMID: 39830242 Free PMC article. Preprint.
21,258 results
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