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AIRR-C IG Reference Sets: curated sets of immunoglobulin heavy and light chain germline genes.
Collins AM, Ohlin M, Corcoran M, Heather JM, Ralph D, Law M, Martínez-Barnetche J, Ye J, Richardson E, Gibson WS, Rodriguez OL, Peres A, Yaari G, Watson CT, Lees WD. Collins AM, et al. Among authors: ye j. Front Immunol. 2024 Feb 9;14:1330153. doi: 10.3389/fimmu.2023.1330153. eCollection 2023. Front Immunol. 2024. PMID: 38406579 Free PMC article.
Database resources of the National Center for Biotechnology Information.
Sayers EW, Beck J, Bolton EE, Bourexis D, Brister JR, Canese K, Comeau DC, Funk K, Kim S, Klimke W, Marchler-Bauer A, Landrum M, Lathrop S, Lu Z, Madden TL, O'Leary N, Phan L, Rangwala SH, Schneider VA, Skripchenko Y, Wang J, Ye J, Trawick BW, Pruitt KD, Sherry ST. Sayers EW, et al. Among authors: ye j. Nucleic Acids Res. 2021 Jan 8;49(D1):D10-D17. doi: 10.1093/nar/gkaa892. Nucleic Acids Res. 2021. PMID: 33095870 Free PMC article. Review.
BLAST: a more efficient report with usability improvements.
Boratyn GM, Camacho C, Cooper PS, Coulouris G, Fong A, Ma N, Madden TL, Matten WT, McGinnis SD, Merezhuk Y, Raytselis Y, Sayers EW, Tao T, Ye J, Zaretskaya I. Boratyn GM, et al. Among authors: ye j. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W29-33. doi: 10.1093/nar/gkt282. Epub 2013 Apr 22. Nucleic Acids Res. 2013. PMID: 23609542 Free PMC article.
Database resources of the National Center for Biotechnology Information in 2025.
Sayers EW, Beck J, Bolton EE, Brister JR, Chan J, Connor R, Feldgarden M, Fine AM, Funk K, Hoffman J, Kannan S, Kelly C, Klimke W, Kim S, Lathrop S, Marchler-Bauer A, Murphy TD, O'Sullivan C, Schmieder E, Skripchenko Y, Stine A, Thibaud-Nissen F, Wang J, Ye J, Zellers E, Schneider VA, Pruitt KD. Sayers EW, et al. Among authors: ye j. Nucleic Acids Res. 2024 Nov 11:gkae979. doi: 10.1093/nar/gkae979. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39526373 Free article.
BLAST: improvements for better sequence analysis.
Ye J, McGinnis S, Madden TL. Ye J, et al. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W6-9. doi: 10.1093/nar/gkl164. Nucleic Acids Res. 2006. PMID: 16845079 Free PMC article.
Database resources of the National Center for Biotechnology Information in 2023.
Sayers EW, Bolton EE, Brister JR, Canese K, Chan J, Comeau DC, Farrell CM, Feldgarden M, Fine AM, Funk K, Hatcher E, Kannan S, Kelly C, Kim S, Klimke W, Landrum MJ, Lathrop S, Lu Z, Madden TL, Malheiro A, Marchler-Bauer A, Murphy TD, Phan L, Pujar S, Rangwala SH, Schneider VA, Tse T, Wang J, Ye J, Trawick BW, Pruitt KD, Sherry ST. Sayers EW, et al. Among authors: ye j. Nucleic Acids Res. 2023 Jan 6;51(D1):D29-D38. doi: 10.1093/nar/gkac1032. Nucleic Acids Res. 2023. PMID: 36370100 Free PMC article.
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