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Page 1
Robust expansion of phylogeny for fast-growing genome sequence data.
Ye Y, Shum MH, Tsui JL, Yu G, Smith DK, Zhu H, Wu JT, Guan Y, Lam TT. Ye Y, et al. Among authors: tsui jl. PLoS Comput Biol. 2024 Feb 8;20(2):e1011871. doi: 10.1371/journal.pcbi.1011871. eCollection 2024 Feb. PLoS Comput Biol. 2024. PMID: 38330139 Free PMC article.
Genomic epidemiology of SARS-CoV-2 under an elimination strategy in Hong Kong.
Gu H, Xie R, Adam DC, Tsui JL, Chu DK, Chang LDJ, Cheuk SSY, Gurung S, Krishnan P, Ng DYM, Liu GYZ, Wan CKC, Cheng SSM, Edwards KM, Leung KSM, Wu JT, Tsang DNC, Leung GM, Cowling BJ, Peiris M, Lam TTY, Dhanasekaran V, Poon LLM. Gu H, et al. Among authors: tsui jl. Nat Commun. 2022 Feb 8;13(1):736. doi: 10.1038/s41467-022-28420-7. Nat Commun. 2022. PMID: 35136039 Free PMC article.
Dispersal patterns and influence of air travel during the global expansion of SARS-CoV-2 variants of concern.
Tegally H, Wilkinson E, Tsui JL, Moir M, Martin D, Brito AF, Giovanetti M, Khan K, Huber C, Bogoch II, San JE, Poongavanan J, Xavier JS, Candido DDS, Romero F, Baxter C, Pybus OG, Lessells RJ, Faria NR, Kraemer MUG, de Oliveira T. Tegally H, et al. Among authors: tsui jl. Cell. 2023 Jul 20;186(15):3277-3290.e16. doi: 10.1016/j.cell.2023.06.001. Epub 2023 Jun 7. Cell. 2023. PMID: 37413988 Free PMC article.
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa.
Viana R, Moyo S, Amoako DG, Tegally H, Scheepers C, Althaus CL, Anyaneji UJ, Bester PA, Boni MF, Chand M, Choga WT, Colquhoun R, Davids M, Deforche K, Doolabh D, du Plessis L, Engelbrecht S, Everatt J, Giandhari J, Giovanetti M, Hardie D, Hill V, Hsiao NY, Iranzadeh A, Ismail A, Joseph C, Joseph R, Koopile L, Kosakovsky Pond SL, Kraemer MUG, Kuate-Lere L, Laguda-Akingba O, Lesetedi-Mafoko O, Lessells RJ, Lockman S, Lucaci AG, Maharaj A, Mahlangu B, Maponga T, Mahlakwane K, Makatini Z, Marais G, Maruapula D, Masupu K, Matshaba M, Mayaphi S, Mbhele N, Mbulawa MB, Mendes A, Mlisana K, Mnguni A, Mohale T, Moir M, Moruisi K, Mosepele M, Motsatsi G, Motswaledi MS, Mphoyakgosi T, Msomi N, Mwangi PN, Naidoo Y, Ntuli N, Nyaga M, Olubayo L, Pillay S, Radibe B, Ramphal Y, Ramphal U, San JE, Scott L, Shapiro R, Singh L, Smith-Lawrence P, Stevens W, Strydom A, Subramoney K, Tebeila N, Tshiabuila D, Tsui J, van Wyk S, Weaver S, Wibmer CK, Wilkinson E, Wolter N, Zarebski AE, Zuze B, Goedhals D, Preiser W, Treurnicht F, Venter M, Williamson C, Pybus OG, Bhiman J, Glass A, Martin DP, Rambaut A, Gaseitsiwe S, von Gottberg A, de Oliveira T. Viana R, et al. Nature. 2022 Mar;603(7902):679-686. doi: 10.1038/s41586-022-04411-y. Epub 2022 Jan 7. Nature. 2022. PMID: 35042229 Free PMC article.
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1.
Tsui JL, McCrone JT, Lambert B, Bajaj S, Inward RPD, Bosetti P, Pena RE, Tegally H, Hill V, Zarebski AE, Peacock TP, Liu L, Wu N, Davis M, Bogoch II, Khan K, Kall M, Abdul Aziz NIB, Colquhoun R, O'Toole Á, Jackson B, Dasgupta A, Wilkinson E, de Oliveira T; COVID-19 Genomics UK (COG-UK) consortium¶; Connor TR, Loman NJ, Colizza V, Fraser C, Volz E, Ji X, Gutierrez B, Chand M, Dellicour S, Cauchemez S, Raghwani J, Suchard MA, Lemey P, Rambaut A, Pybus OG, Kraemer MUG. Tsui JL, et al. Science. 2023 Jul 21;381(6655):336-343. doi: 10.1126/science.adg6605. Epub 2023 Jul 20. Science. 2023. PMID: 37471538 Free PMC article.
Toward optimal disease surveillance with graph-based active learning.
Tsui JL, Zhang M, Sambaturu P, Busch-Moreno S, Suchard MA, Pybus OG, Flaxman S, Semenova E, Kraemer MUG. Tsui JL, et al. Proc Natl Acad Sci U S A. 2024 Dec 24;121(52):e2412424121. doi: 10.1073/pnas.2412424121. Epub 2024 Dec 19. Proc Natl Acad Sci U S A. 2024. PMID: 39700149 Free PMC article.
Dengue virus importation risks in Africa: a modelling study.
Poongavanan J, Lourenço J, Tsui JL, Colizza V, Ramphal Y, Baxter C, Kraemer MUG, Dunaiski M, de Oliveira T, Tegally H. Poongavanan J, et al. Among authors: tsui jl. Lancet Planet Health. 2024 Dec;8(12):e1043-e1054. doi: 10.1016/S2542-5196(24)00272-9. Lancet Planet Health. 2024. PMID: 39674194 Free PMC article.
Exploring Candesartan, an angiotensin II receptor antagonist, as a novel inhibitor of NLRP3 inflammasome: alleviating inflammation in Neisseria gonorrhoeae infection.
Lin WY, Tsui JL, Chiu HW, Wong WT, Wu CH, Hsu HT, Ho CL, Yeh SP, Rao YK, Chen A, Wang CC, Hsu CH, Chernikov OV, Hua KF, Li LH. Lin WY, et al. Among authors: tsui jl. BMC Infect Dis. 2024 Nov 22;24(1):1338. doi: 10.1186/s12879-024-10208-3. BMC Infect Dis. 2024. PMID: 39578786 Free PMC article.
Assessing Dengue Virus Importation Risks in Africa: A Climate and Travel-Based Model.
Poongavanan J, Lourenço J, Tsui JL, Colizza V, Ramphal Y, Baxter C, Kraemer MUG, Dunaiski M, de Oliveira T, Tegally H. Poongavanan J, et al. Among authors: tsui jl. medRxiv [Preprint]. 2024 Oct 29:2024.05.07.24306997. doi: 10.1101/2024.05.07.24306997. medRxiv. 2024. Update in: Lancet Planet Health. 2024 Dec;8(12):e1043-e1054. doi: 10.1016/S2542-5196(24)00272-9 PMID: 39574849 Free PMC article. Updated. Preprint.
25 results