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Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy.
Larivière D, Abueg L, Brajuka N, Gallardo-Alba C, Grüning B, Ko BJ, Ostrovsky A, Palmada-Flores M, Pickett BD, Rabbani K, Antunes A, Balacco JR, Chaisson MJP, Cheng H, Collins J, Couture M, Denisova A, Fedrigo O, Gallo GR, Giani AM, Gooder GM, Horan K, Jain N, Johnson C, Kim H, Lee C, Marques-Bonet T, O'Toole B, Rhie A, Secomandi S, Sozzoni M, Tilley T, Uliano-Silva M, van den Beek M, Williams RW, Waterhouse RM, Phillippy AM, Jarvis ED, Schatz MC, Nekrutenko A, Formenti G. Larivière D, et al. Among authors: o toole b. Nat Biotechnol. 2024 Mar;42(3):367-370. doi: 10.1038/s41587-023-02100-3. Nat Biotechnol. 2024. PMID: 38278971 Free PMC article. No abstract available.
Scalable, accessible, and reproducible reference genome assembly and evaluation in Galaxy.
Larivière D, Abueg L, Brajuka N, Gallardo-Alba C, Grüning B, Ko BJ, Ostrovsky A, Palmada-Flores M, Pickett BD, Rabbani K, Balacco JR, Chaisson M, Cheng H, Collins J, Denisova A, Fedrigo O, Gallo GR, Giani AM, Gooder GM, Jain N, Johnson C, Kim H, Lee C, Marques-Bonet T, O'Toole B, Rhie A, Secomandi S, Sozzoni M, Tilley T, Uliano-Silva M, van den Beek M, Waterhouse RM, Phillippy AM, Jarvis ED, Schatz MC, Nekrutenko A, Formenti G. Larivière D, et al. Among authors: o toole b. bioRxiv [Preprint]. 2023 Jun 30:2023.06.28.546576. doi: 10.1101/2023.06.28.546576. bioRxiv. 2023. Update in: Nat Biotechnol. 2024 Mar;42(3):367-370. doi: 10.1038/s41587-023-02100-3 PMID: 37425881 Free PMC article. Updated. Preprint.
The genome sequence of Rhynchonycteris naso, Peters, 1867 (Chiroptera, Emballonuridae, Rhynchonycteris).
Alvarez van Tussenbroek I, Knörnschild M, Nagy M, O'Toole BP, Formenti G, Philge P, Zhang N, Abueg L, Brajuka N, Jarvis E, Volkert TL, Gray JL, Pieri M, Mai M, Teeling EC, Vernes SC; Bat Biology Foundation; Bat1K Consortium. Alvarez van Tussenbroek I, et al. Among authors: o toole bp. Wellcome Open Res. 2024 Jul 10;9:361. doi: 10.12688/wellcomeopenres.19959.1. eCollection 2024. Wellcome Open Res. 2024. PMID: 39239167 Free PMC article.
The genome sequence of Molossus alvarezi González-Ruiz, Ramírez-Pulido and Arroyo-Cabrales, 2011 (Chiroptera, Molossidae).
Simmons NB, Ingala MR, Pieri M, O'Toole BP, Gray JL, Philge P, L Volkert T, Zhang N, Abueg L, Brajuka N, Jarvis E, Formenti G, McCaffrey K, Mai M, Teeling EC, C Vernes S; Bat Biology Foundation; Bat1K Consortium. Simmons NB, et al. Among authors: o toole bp. Wellcome Open Res. 2024 Sep 12;9:522. doi: 10.12688/wellcomeopenres.22726.1. eCollection 2024. Wellcome Open Res. 2024. PMID: 39411461 Free PMC article.
Ecological diversification of sea catfishes is accompanied by genome-wide signatures of positive selection.
Rincon-Sandoval M, De-Kayne R, Shank SD, Pirro S, Ko'ou A, Abueg L, Tracey A, Mountcastle J, O'Toole B, Balacco J, Formenti G, Jarvis ED, Arcila D, Kosakovsky Pond SL, Davis A, Bloom DD, Betancur-R R. Rincon-Sandoval M, et al. Among authors: o toole b. Nat Commun. 2024 Nov 20;15(1):10040. doi: 10.1038/s41467-024-54184-3. Nat Commun. 2024. PMID: 39567489 Free PMC article.
How to use podcasts in neurology.
Mason F, Mayer J, O'Toole B, Williamson J, Ross Russell A. Mason F, et al. Among authors: o toole b. Pract Neurol. 2024 Sep 13;24(5):387-392. doi: 10.1136/pn-2024-004109. Pract Neurol. 2024. PMID: 38769014
The genome sequence of Molossusnigricans (Chiroptera, Molossidae; Miller, 1902).
Simmons NB, Ingala MR, Pieri M, Volkert TL, Singh LN, Philip P, Lindsey LL, Zhang N, Gray JL, O'Toole BP, Mai M, Teeling EC, Vernes SC; Bat Biology Foundation; Bat1K Consortium. Simmons NB, et al. Among authors: o toole bp. Wellcome Open Res. 2023 May 5;8:198. doi: 10.12688/wellcomeopenres.18724.1. eCollection 2023. Wellcome Open Res. 2023. PMID: 37600588 Free PMC article.
127 results